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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 6
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d052158_P001 Maize golgi, vacuole 82.32 76.75
TraesCS6D01G312600.1 Wheat vacuole 67.55 67.55
TraesCS6B01G363900.1 Wheat endoplasmic reticulum, extracellular, vacuole 67.55 67.55
TraesCS6A01G333500.1 Wheat extracellular, vacuole 66.1 66.1
TraesCS6D01G311900.1 Wheat vacuole 67.55 65.49
TraesCS6B01G363700.1 Wheat golgi, vacuole 66.83 64.64
TraesCS6B01G363800.1 Wheat golgi, vacuole 62.47 64.18
TraesCS6A01G333300.1 Wheat golgi, vacuole 65.86 63.85
HORVU0Hr1G017220.2 Barley mitochondrion, vacuole 66.59 63.51
TraesCS6A01G333400.1 Wheat golgi, vacuole 64.16 62.5
TraesCS6D01G312500.1 Wheat golgi, vacuole 62.23 61.19
PGSC0003DMT400090248 Potato cytosol 40.19 60.81
GSMUA_Achr6P30560_001 Banana vacuole 60.77 60.34
PGSC0003DMT400095096 Potato cytosol 44.31 59.42
Solyc01g008710.2.1 Tomato extracellular 54.48 56.39
KRH68364 Soybean vacuole 55.21 55.61
KRG96633 Soybean nucleus 54.96 55.37
EES01213 Sorghum golgi, vacuole 57.63 55.09
Solyc01g008720.1.1 Tomato extracellular, golgi, vacuole 52.3 53.87
OQU79706 Sorghum vacuole 39.95 52.88
KRG96685 Soybean golgi, vacuole 52.54 51.79
KRH68408 Soybean vacuole 51.09 50.84
KRH33420 Soybean extracellular, golgi 41.4 50.29
Bra033312.1-P Field mustard golgi, vacuole 47.46 47.69
CDX89985 Canola golgi, vacuole 47.22 47.45
CDY15229 Canola golgi, vacuole 46.0 46.57
AT1G02310.2 Thale cress golgi, vacuole 46.49 44.55
EES09143 Sorghum cytosol, plasma membrane, plastid, vacuole 45.04 43.56
Os02t0766900-00 Rice extracellular, golgi, vacuole 41.89 40.52
EES03598 Sorghum endoplasmic reticulum, vacuole 43.58 39.05
EER93344 Sorghum mitochondrion 47.22 38.24
OQU76322 Sorghum golgi, vacuole 39.95 37.67
OQU90687 Sorghum mitochondrion 48.43 36.5
Protein Annotations
MapMan:21.2.3.2.2Gene3D:3.20.20.80UniProt:A0A194YTK1GO:GO:0003674GO:GO:0003824GO:GO:0004553
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016787GO:GO:0016798InterPro:Glyco_hydro_5
InterPro:Glycoside_hydrolase_SFEnsemblPlants:KXG31170ProteinID:KXG31170ProteinID:KXG31170.1PFAM:PF00150PANTHER:PTHR31451
PANTHER:PTHR31451:SF20EnsemblPlantsGene:SORBI_3004G309700SUPFAM:SSF51445SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0007F26693
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr4:-:64670926..64672957
Molecular Weight (calculated)
44956.0 Da
IEP (calculated)
7.705
GRAVY (calculated)
-0.142
Length
413 amino acids
Sequence
(BLAST)
001: MASRRAILLG LAVLSLAAAA FVRTAGHGAG ELAGNAAFAK ASGTRFTLGG RPFYSNGFNA YWLMYMASDP ADRSKATAAL DEAARVGATL VRTWAFSDGG
101: YRALQVSPGV YNEQVFRGLD YVISEAKKRG IHLILSLVNN WDGYGGKKQY VQWARTQGHN LNSDDDFFTN SVTKGFYKNH VKAVLTRVNK ITGVAYKDDP
201: TIFAWELMNE PRCQSDLSGK ALQAWITEMA GYVKSVDPNH MVEIGLEGFY GESTPDRTHK FNPGGYAVGT DFISNNLIPG IDFATIHSYP DQWVPGASND
301: AQVAFMRRWM ASHAGDAAAV LRKPLLVAEF GWSARSNGYT VSMRDAYFRM VYDAIYASAS AGGPLAGGLF WQVMVPGMES WTDGYDVVLD RSPSTADVVS
401: QECARITGLN QVS
Best Arabidopsis Sequence Match ( AT5G66460.1 )
(BLAST)
001: MKLLALFPFL AIVIQLSCWE LGTDALPSGG FVRTKGVQFS LNGYPYYANG FNAYWLMYVA SDPSQRSKIS TAFQDASRHG LTVARTWAFS DGGYRALQYS
101: PGSYNEDMFQ GLDFALAEAR RHGIKIILSF ANNYESFGGR KQYVDWARSR GRPVSSEDDF FTDSLVKDFY KNHIKAVLNR FNTFTKVHYK DDPTIMAWEL
201: MNEPRCPSDP SGRAIQAWIT EMAAHVKSLD RNHLLEAGLE GFYGQSSPQS KTLNPPGQFG TDFIANNRIP GIDFVTVHSY PDEWFPDSSE QSQMDFLNKW
301: LDAHIQDAQN VLHKPIILAE FGKSMKKPGY TPAQRDIVFN TVYSKIYGSA KRGGAAAGGL FWQLLVNGID NFQDGYGIIL SQSSSTVNVI SQQSRKLTLI
401: RKIFARMINV EKWKRARGQG QVGKRGHKIN N
Arabidopsis Description
MAN7MAN7 [Source:UniProtKB/TrEMBL;Acc:A0A178UNQ8]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.