Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G312600.1 | Wheat | vacuole | 94.19 | 94.19 |
| TraesCS6B01G363900.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 93.95 | 93.95 |
| TraesCS6A01G333400.1 | Wheat | golgi, vacuole | 73.37 | 71.46 |
| TraesCS6A01G333300.1 | Wheat | golgi, vacuole | 73.37 | 71.13 |
| KXG31170 | Sorghum | golgi, vacuole | 66.1 | 66.1 |
| PGSC0003DMT400090248 | Potato | cytosol | 37.29 | 56.41 |
| Zm00001d052158_P001 | Maize | golgi, vacuole | 58.84 | 54.85 |
| GSMUA_Achr6P30560_001 | Banana | vacuole | 54.96 | 54.57 |
| PGSC0003DMT400095096 | Potato | cytosol | 39.23 | 52.6 |
| KRH68364 | Soybean | vacuole | 52.06 | 52.44 |
| KRG96633 | Soybean | nucleus | 51.82 | 52.2 |
| Solyc01g008710.2.1 | Tomato | extracellular | 49.39 | 51.13 |
| TraesCS3A01G241000.1 | Wheat | golgi, vacuole | 51.82 | 50.35 |
| Solyc01g008720.1.1 | Tomato | extracellular, golgi, vacuole | 47.94 | 49.38 |
| KRH68408 | Soybean | vacuole | 47.46 | 47.23 |
| KRG96685 | Soybean | golgi, vacuole | 47.7 | 47.02 |
| KRH33420 | Soybean | extracellular, golgi | 37.77 | 45.88 |
| Bra033312.1-P | Field mustard | golgi, vacuole | 44.31 | 44.53 |
| CDX89985 | Canola | golgi, vacuole | 44.07 | 44.28 |
| CDY15229 | Canola | golgi, vacuole | 42.86 | 43.38 |
| AT1G02310.2 | Thale cress | golgi, vacuole | 42.86 | 41.07 |
| TraesCS4A01G368600.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 44.79 | 39.28 |
| TraesCS5A01G146400.1 | Wheat | mitochondrion, plasma membrane, plastid, vacuole | 38.26 | 37.62 |
| Os02t0766900-00 | Rice | extracellular, golgi, vacuole | 38.74 | 37.47 |
| TraesCS3A01G274200.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 39.23 | 36.49 |
| TraesCS7A01G223800.1 | Wheat | cytosol | 30.02 | 31.23 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G333500.1 | EnsemblPlantsGene:TraesCS6A01G333500 | Gene3D:3.20.20.80 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 |
| GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | InterPro:Glyco_hydro_5 | InterPro:Glycoside_hydrolase_SF |
| PANTHER:PTHR31451 | PANTHER:PTHR31451:SF20 | PFAM:PF00150 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF51445 |
| MapMan:21.2.3.2.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6A:+:564584575..564586934
Molecular Weight (calculated)
45881.6 Da
IEP (calculated)
8.868
GRAVY (calculated)
-0.229
Length
413 amino acids
Sequence
(BLAST)
(BLAST)
001: MATSSPQLVM LVSCLAALAV AAGAGEVDGR PKARGFVTVS GARFMAGGRR FYADGFNAYW LMYMASNPAD RSKVVDVLEQ ASRLGATVVR TWAFSDGQGS
101: DRPLQITPGV YNEQVFVGLD FVIAEAKKRG IYLILSLVNN MDSFGGKKQY VKWARDRGHY LGSNDDFFSD ALTQQFYKNH IKRMITRVNT FTRVAYKDEP
201: TIFAWELMNE PRVPSDLSGK TMERWVASMS AYVKYVDPKH MVEIGMEGFY GESTPERKRF NPGQGYTAGT DFVSNNRIPT VDFATIHVYP DQWMPGSSSQ
301: AQVEFTKRWM ASHIEDAGKA LRKPLLVAEF GWSARSGGYT VAARDGYFRM VYDAIYASVK GNGPCAGGLF WHVMAPGMES WTDGYDVVFE RSPTTAAVVS
401: QECAKIDRFT PAV
101: DRPLQITPGV YNEQVFVGLD FVIAEAKKRG IYLILSLVNN MDSFGGKKQY VKWARDRGHY LGSNDDFFSD ALTQQFYKNH IKRMITRVNT FTRVAYKDEP
201: TIFAWELMNE PRVPSDLSGK TMERWVASMS AYVKYVDPKH MVEIGMEGFY GESTPERKRF NPGQGYTAGT DFVSNNRIPT VDFATIHVYP DQWMPGSSSQ
301: AQVEFTKRWM ASHIEDAGKA LRKPLLVAEF GWSARSGGYT VAARDGYFRM VYDAIYASVK GNGPCAGGLF WHVMAPGMES WTDGYDVVFE RSPTTAAVVS
401: QECAKIDRFT PAV
001: MKCLCFIVLL AIVIAQSYVG VEAAPSDGFV SRNGVQFILN GKPFYANGFN AYWLAYEATD PTTRFKITNV FQNATSLGLT IARTWGFRDG AIYRALQTAP
101: GSYDEQTFQG LDFVIAEAKR IGIKLIILLV NNWDDYGGKK QYVDWARSKG EVVSSNDDFY RNPVIKDFYK NHVKTVLNRV NTFTKVAYKD EPAIMAWQLM
201: NEPRCGVDKS GKTLMDWINE MAPFVKSVDP NHLLSTGHEG FYGDSSPERK NSLNPVSANT VGADFIANHN IDAIDFASMH CGSDLWFQRL DQNSRLAFIK
301: RWLEGHIEDA QNILKKPVIL AEFGLGSDTP RYTLANRDGV FTTTYDIIYA SAQKGGSAAG ALFWEVISEG MSNFAGPSSI ILSDKSSTVN IISEHARKMG
401: LLGETTRK
101: GSYDEQTFQG LDFVIAEAKR IGIKLIILLV NNWDDYGGKK QYVDWARSKG EVVSSNDDFY RNPVIKDFYK NHVKTVLNRV NTFTKVAYKD EPAIMAWQLM
201: NEPRCGVDKS GKTLMDWINE MAPFVKSVDP NHLLSTGHEG FYGDSSPERK NSLNPVSANT VGADFIANHN IDAIDFASMH CGSDLWFQRL DQNSRLAFIK
301: RWLEGHIEDA QNILKKPVIL AEFGLGSDTP RYTLANRDGV FTTTYDIIYA SAQKGGSAAG ALFWEVISEG MSNFAGPSSI ILSDKSSTVN IISEHARKMG
401: LLGETTRK
Arabidopsis Description
MAN4Putative mannan endo-1,4-beta-mannosidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SG95]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.