Factsheet for TraesCS4A01G368600.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 5
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G504800.1	Wheat	vacuole	93.63	92.84
TraesCS5B01G504000.1	Wheat	extracellular, golgi, vacuole	92.14	91.95
HORVU5Hr1G115310.4	Barley	golgi, vacuole	69.21	81.3
Os03t0828500-01	Rice	plasma membrane, plastid, vacuole	64.33	65.73
Os03t0828300-01	Rice	extracellular, vacuole	26.11	65.08
Zm00001d034723_P001	Maize	vacuole	64.54	63.33
OQU90687	Sorghum	mitochondrion	65.82	56.57
TraesCS3A01G241000.1	Wheat	golgi, vacuole	43.52	48.24
TraesCS6A01G333400.1	Wheat	golgi, vacuole	42.68	47.41
TraesCS6A01G333500.1	Wheat	extracellular, vacuole	39.28	44.79
TraesCS6A01G333300.1	Wheat	golgi, vacuole	40.34	44.6
TraesCS5A01G146400.1	Wheat	mitochondrion, plasma membrane, plastid, vacuole	33.97	38.1
TraesCS3A01G274200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	33.97	36.04
TraesCS7A01G223800.1	Wheat	cytosol	27.6	32.75

Protein Annotations

EnsemblPlants:TraesCS4A01G368600.1	EnsemblPlantsGene:TraesCS4A01G368600	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_5	InterPro:Glycoside_hydrolase_SF
PANTHER:PTHR31451	PANTHER:PTHR31451:SF18	PFAM:PF00150	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF51445
TMHMM:TMhelix	MapMan:21.2.3.2.2	:	:	:	:

Description

No Description!

Coordinates

chr4A:-:641382143..641383810

Molecular Weight (calculated)

51865.0 Da

IEP (calculated)

5.851

GRAVY (calculated)

-0.201

Length

471 amino acids

Sequence
(BLAST)

001: MRPRPPADLV VGLFLLAVLV VVPWHAAAAG GDGGGMVRTD GTRFVAGDGD RTVYLSGFNA YWLMEMASDP SRRGGVVSAF RQAAAHGLNL ARTWAFSDGG
101: DRPLQSSPSV YHEDMFQGLD FVVAEARRHG IYLLLCLTNN FDDFGGKRQY VQWAREDVAA GAGAHNLTSA DDFFDNTLVK SYYKNHVKTV LTRVNTVSGV
201: AYRDDPAIFG WELMNEPRCG ADPTGAMVQA WVEEMAPYLK AIDAAHLVTA GLEGFYGDGA HESKELNPWG IYYGTNFVAT HQAAGIDFAT IHLYPDVWLW
301: GSTADQQARF FRNWTASHVS DTHRHLRKPL LVTEYGKFLW EEGGENATSA TQRRDRFLGT VLDAIYESAS RGGPLVGGAF WQLLLDGDGM DALKDGYQIV
401: LPEDARAASI ISDHSEKMAE LSEQDAAESG RRTTRKIGSF VSWDGTHPYV QRFLIRFVSL LRSVSSLFGP M

Best Arabidopsis Sequence Match ( AT1G02310.1 )
(BLAST)

001: MLNILPFFLF FLPFLIGNNR ICVAVKTGFV GRNGTQFVLN GEQVYLNGFN AYWMMTTAAD TASKGRATVT TALRQASAVG MNVARIWGFN EGDYIPLQIS
101: PGSYSEDVFK GLDFVVYEAG RFNIKLIISL VNNFEDYGGR KKYVEWAGLD EPDEFYTNSA VKQFYKNHVK TVLTRKNTIT GRMYKDDPTI FSWELINEPR
201: CNDSTASNIL QDWVKEMASY VKSIDSNHLL EIGLEGFYGE SIPERTVYNP GGRVLTGTDF ITNNQIPDID FATIHIYPDS WLPLQSSRTG EQDTFVDRWI
301: GAHIEDCDNI IKKPLLITEF GKSSKYPGFS LEKRNKFFQR VYDVIYDSAR AGGSCTGGVF WQLTTNRTGL LGDGYEVFMQ AGPNTTAQLI ADQSSKLKNL
401: KYPPLVTHSA E

Arabidopsis Description

MAN1Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8AQX8]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.