CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034723_P001	Maize	vacuole	76.82	87.71
Os03t0828300-01	Rice	extracellular, vacuole	25.18	73.02
Os03t0828500-01	Rice	plasma membrane, plastid, vacuole	57.66	68.55
TraesCS5D01G504800.1	Wheat	vacuole	57.85	66.74
TraesCS5B01G504000.1	Wheat	extracellular, golgi, vacuole	57.12	66.31
TraesCS4A01G368600.1	Wheat	endoplasmic reticulum, golgi, vacuole	56.57	65.82
HORVU5Hr1G115310.4	Barley	golgi, vacuole	46.17	63.09
KXG31170	Sorghum	golgi, vacuole	36.5	48.43
EES01213	Sorghum	golgi, vacuole	37.96	48.15
OQU79706	Sorghum	vacuole	27.01	47.44
EES09143	Sorghum	cytosol, plasma membrane, plastid, vacuole	30.47	39.11
EES03598	Sorghum	endoplasmic reticulum, vacuole	31.75	37.74
EER93344	Sorghum	mitochondrion	34.85	37.45
OQU76322	Sorghum	golgi, vacuole	28.1	35.16

Protein Annotations

MapMan:21.2.3.2.2	Gene3D:3.20.20.80	UniProt:A0A1Z5S421	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005575	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016798	InterPro:Glyco_hydro_5	InterPro:Glyco_hydro_5_CS	InterPro:Glycoside_hydrolase_SF	EnsemblPlants:OQU90687
ProteinID:OQU90687	ProteinID:OQU90687.1	PFAM:PF00150	ScanProsite:PS00659	PANTHER:PTHR31451	PANTHER:PTHR31451:SF18
EnsemblPlantsGene:SORBI_3001G027800	SUPFAM:SSF51445	TMHMM:TMhelix	UniParc:UPI000B8B95FB	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:+:2143844..2146691

Molecular Weight (calculated)

60116.3 Da

IEP (calculated)

7.670

GRAVY (calculated)

-0.143

Length

548 amino acids

Sequence
(BLAST)

001: MVASRALPIR FSSRVPVPGG ALLNARARAA GRALNPTDKP IDACAAVNDR WCTGGSCWSQ QMAKAKPRPA AAILLLLISF LAAAAAGGGS DAETTGGGGG
101: MVGVDGTRFV VDDGRPIYFS GFNAYWLMLV ASDPARRGKV VAAFRQAADH GLNLARTWAF SDGGDTPLQA APGVYDEAMF QGLDFVVAEA RRHGIYLLLC
201: LTNNFHDFGG KRQYVQWARD AGHRLATDDD FFNSTVVKDY YKNHVKTVLT RVNTLTGVAY KDDPTILGWE LMNEPRCDAE PTGAMVQAWV EEMAPYVKSI
301: DGEHLVTAGL EGFYGAGAHE SKDLNPWGIY YGTNFVETHR ARGVDFATIH LYPDVWLWGS AADAQLAFLR NWTRSHARDA DLYLRKPLLV TEYGKFLWEG
401: VAGANRTQRD YFLRLVLDSI YDSAARGGPL VGGAFWQLLD GGMDTLRDGY EIILPEDRLA ATIIGNHSRQ LAQLSLVTFT GEDVDIEAAA LRRRSRRSPH
501: SNRKIRVRSV GGPSDSDSYY TQTQRLLHIL LVRFMSLFTS ISSLFSSV

Best Arabidopsis Sequence Match ( AT5G66460.1 )
(BLAST)

001: MKLLALFPFL AIVIQLSCWE LGTDALPSGG FVRTKGVQFS LNGYPYYANG FNAYWLMYVA SDPSQRSKIS TAFQDASRHG LTVARTWAFS DGGYRALQYS
101: PGSYNEDMFQ GLDFALAEAR RHGIKIILSF ANNYESFGGR KQYVDWARSR GRPVSSEDDF FTDSLVKDFY KNHIKAVLNR FNTFTKVHYK DDPTIMAWEL
201: MNEPRCPSDP SGRAIQAWIT EMAAHVKSLD RNHLLEAGLE GFYGQSSPQS KTLNPPGQFG TDFIANNRIP GIDFVTVHSY PDEWFPDSSE QSQMDFLNKW
301: LDAHIQDAQN VLHKPIILAE FGKSMKKPGY TPAQRDIVFN TVYSKIYGSA KRGGAAAGGL FWQLLVNGID NFQDGYGIIL SQSSSTVNVI SQQSRKLTLI
401: RKIFARMINV EKWKRARGQG QVGKRGHKIN N

Arabidopsis Description

MAN7MAN7 [Source:UniProtKB/TrEMBL;Acc:A0A178UNQ8]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.