Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 5
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS5D01G504800.1 | Wheat | vacuole | 95.34 | 94.74 |
TraesCS4A01G368600.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 91.95 | 92.14 |
HORVU5Hr1G115310.4 | Barley | golgi, vacuole | 69.92 | 82.29 |
Os03t0828500-01 | Rice | plasma membrane, plastid, vacuole | 64.19 | 65.73 |
Os03t0828300-01 | Rice | extracellular, vacuole | 26.27 | 65.61 |
Zm00001d034723_P001 | Maize | vacuole | 65.04 | 63.96 |
OQU90687 | Sorghum | mitochondrion | 66.31 | 57.12 |
TraesCS6B01G363800.1 | Wheat | golgi, vacuole | 40.89 | 48.01 |
TraesCS3B01G269200.1 | Wheat | extracellular | 42.8 | 47.53 |
TraesCS6B01G363900.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 38.98 | 44.55 |
TraesCS6B01G363700.1 | Wheat | golgi, vacuole | 40.04 | 44.26 |
TraesCS5B01G145200.1 | Wheat | mitochondrion, plasma membrane, vacuole | 34.32 | 38.57 |
TraesCS3B01G307900.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 34.32 | 36.49 |
TraesCS7B01G190600.1 | Wheat | vacuole | 33.47 | 36.16 |
Protein Annotations
EnsemblPlants:TraesCS5B01G504000.1 | EnsemblPlantsGene:TraesCS5B01G504000 | Gene3D:3.20.20.80 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 |
GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | InterPro:Glyco_hydro_5 | InterPro:Glycoside_hydrolase_SF |
PANTHER:PTHR31451 | PANTHER:PTHR31451:SF18 | PFAM:PF00150 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF51445 |
TMHMM:TMhelix | MapMan:21.2.3.2.2 | : | : | : | : |
Description
No Description!
Coordinates
chr5B:+:670128164..670129826
Molecular Weight (calculated)
52088.5 Da
IEP (calculated)
6.398
GRAVY (calculated)
-0.176
Length
472 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPRPPAIVI SLLLLLLLAV PRHGAAAGWG DGGMVRTDGT RFVAGDGDRT VYLSGFNAYW LMEMASDPSR RGGVVSAFRQ AAAHGLNLAR TWAFSDGGRS
101: PLQSSPGVYH EDMFQGLDFV IAEARRHGIY LLLCLTNNFD DFGGKRQYVQ WAREDVAAGA AAHNLTSADD FFNNTLIKSY YKNHVKTVLT RVNTVTGVAY
201: RDDPAIFGWE LMNEPRCGAE PTGALVQAWV EEMAPYLKTI DAAHLVTAGL EGFYGDGAHE SKDLNPWGIY YGTNFVATHQ AAGIDFATIH LYPDVWLWGS
301: TADQQARFFR NWTASHVRDT ERHLRKPLLV TEYGKFLWEE GGENATSATQ RRDGFLGMVL DAIYESASRG GPLVGGAFWQ LLLDGDGMDA LKDGYQIVLP
401: EDARAASIIS DHSEKMAELS KQDAAEAGRR WSRKIGSFVS WDGTHPYVQK FLIRFVSLFR SVSSLFGPIV AT
101: PLQSSPGVYH EDMFQGLDFV IAEARRHGIY LLLCLTNNFD DFGGKRQYVQ WAREDVAAGA AAHNLTSADD FFNNTLIKSY YKNHVKTVLT RVNTVTGVAY
201: RDDPAIFGWE LMNEPRCGAE PTGALVQAWV EEMAPYLKTI DAAHLVTAGL EGFYGDGAHE SKDLNPWGIY YGTNFVATHQ AAGIDFATIH LYPDVWLWGS
301: TADQQARFFR NWTASHVRDT ERHLRKPLLV TEYGKFLWEE GGENATSATQ RRDGFLGMVL DAIYESASRG GPLVGGAFWQ LLLDGDGMDA LKDGYQIVLP
401: EDARAASIIS DHSEKMAELS KQDAAEAGRR WSRKIGSFVS WDGTHPYVQK FLIRFVSLFR SVSSLFGPIV AT
001: MLNILPFFLF FLPFLIGNNR ICVAVKTGFV GRNGTQFVLN GEQVYLNGFN AYWMMTTAAD TASKGRATVT TALRQASAVG MNVARIWGFN EGDYIPLQIS
101: PGSYSEDVFK GLDFVVYEAG RFNIKLIISL VNNFEDYGGR KKYVEWAGLD EPDEFYTNSA VKQFYKNHVK TVLTRKNTIT GRMYKDDPTI FSWELINEPR
201: CNDSTASNIL QDWVKEMASY VKSIDSNHLL EIGLEGFYGE SIPERTVYNP GGRVLTGTDF ITNNQIPDID FATIHIYPDS WLPLQSSRTG EQDTFVDRWI
301: GAHIEDCDNI IKKPLLITEF GKSSKYPGFS LEKRNKFFQR VYDVIYDSAR AGGSCTGGVF WQLTTNRTGL LGDGYEVFMQ AGPNTTAQLI ADQSSKLKNL
401: KYPPLVTHSA E
101: PGSYSEDVFK GLDFVVYEAG RFNIKLIISL VNNFEDYGGR KKYVEWAGLD EPDEFYTNSA VKQFYKNHVK TVLTRKNTIT GRMYKDDPTI FSWELINEPR
201: CNDSTASNIL QDWVKEMASY VKSIDSNHLL EIGLEGFYGE SIPERTVYNP GGRVLTGTDF ITNNQIPDID FATIHIYPDS WLPLQSSRTG EQDTFVDRWI
301: GAHIEDCDNI IKKPLLITEF GKSSKYPGFS LEKRNKFFQR VYDVIYDSAR AGGSCTGGVF WQLTTNRTGL LGDGYEVFMQ AGPNTTAQLI ADQSSKLKNL
401: KYPPLVTHSA E
Arabidopsis Description
MAN1Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8AQX8]
SUBAcon: [golgi,vacuole]
SUBAcon: [golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.