Factsheet for TraesCS6B01G363800.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G312500.1	Wheat	golgi, vacuole	94.78	90.71
TraesCS6A01G333400.1	Wheat	golgi, vacuole	93.03	88.21
TraesCS6B01G363700.1	Wheat	golgi, vacuole	82.34	77.52
TraesCS6B01G363900.1	Wheat	endoplasmic reticulum, extracellular, vacuole	74.13	72.16
KXG31170	Sorghum	golgi, vacuole	64.18	62.47
GSMUA_Achr6P30560_001	Banana	vacuole	55.72	53.85
Zm00001d052158_P001	Maize	golgi, vacuole	58.71	53.27
PGSC0003DMT400090248	Potato	cytosol	35.57	52.38
KRH68364	Soybean	vacuole	53.23	52.2
KRG96633	Soybean	nucleus	52.99	51.95
PGSC0003DMT400095096	Potato	cytosol	39.55	51.62
Solyc01g008710.2.1	Tomato	extracellular	48.26	48.62
Solyc01g008720.1.1	Tomato	extracellular, golgi, vacuole	47.26	47.38
TraesCS3B01G269200.1	Wheat	extracellular	49.5	46.82
KRH68408	Soybean	vacuole	46.27	44.82
KRG96685	Soybean	golgi, vacuole	45.77	43.91
Bra033312.1-P	Field mustard	golgi, vacuole	44.78	43.8
CDX89985	Canola	golgi, vacuole	44.53	43.55
CDY15229	Canola	golgi, vacuole	43.53	42.89
KRH33420	Soybean	extracellular, golgi	35.07	41.47
TraesCS5B01G145200.1	Wheat	mitochondrion, plasma membrane, vacuole	42.79	40.95
TraesCS5B01G504000.1	Wheat	extracellular, golgi, vacuole	48.01	40.89
AT1G02310.2	Thale cress	golgi, vacuole	43.78	40.84
Os02t0766900-00	Rice	extracellular, golgi, vacuole	40.05	37.7
TraesCS3B01G307900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	41.54	37.61
TraesCS7B01G190600.1	Wheat	vacuole	39.55	36.38

Protein Annotations

EnsemblPlants:TraesCS6B01G363800.1	EnsemblPlantsGene:TraesCS6B01G363800	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_5	InterPro:Glycoside_hydrolase_SF
PANTHER:PTHR31451	PANTHER:PTHR31451:SF20	PFAM:PF00150	SignalP:SignalP-noTM	SUPFAM:SSF51445	TMHMM:TMhelix
MapMan:21.2.3.2.2	:	:	:	:	:

Description

No Description!

Coordinates

chr6B:+:634939976..634942439

Molecular Weight (calculated)

44385.8 Da

IEP (calculated)

6.380

GRAVY (calculated)

-0.153

Length

402 amino acids

Sequence
(BLAST)

001: MGTSNARWLM LVSCLAVMAL AVGVKATVGG FARADGARFT VGGRPFYPNG FNAYWLMYMA SNPADRSKVL DVLDQASRLG ATVIRTWAFS DGGSNRPLQT
101: TPGVYSEDVF VGLDFVIAEA KKRGLYLILS LVNNWGDFGG KKQYVQWAKD QGHNLGSEDD FFRDALTQQL YKKHVEKVLT RINSFTGVAY KDEPSIFAWE
201: LMNEPRVPTD PSGKTMQAWV TLMSSYVKSM DDKHMVEVGL EGFYGESTPE LKRINPGGDS AGTDFIGNNR IPTVDFATIH YYPDVWLPGS TREQQVEFWK
301: TWMASHIEET AKALRKPLVV AEFGWNSVGG AVAARDDYFR MVYDAIYASV KGGGPCAGGL FWQVLAPGME SWADRYAVVL ERSSTTAAIV SQEFARIAGI
401: TP

Best Arabidopsis Sequence Match ( AT1G02310.2 )
(BLAST)

001: MSLTFHVVSF SFLQVGKSIT MLNILPFFLF FLPFLIGNNR ICVAVKTGFV GRNGTQFVLN GEQVYLNGFN AYWMMTTAAD TASKGRATVT TALRQASAVG
101: MNVARIWGFN EGDYIPLQIS PGSYSEDVFK GLDFVVYEAG RFNIKLIISL VNNFEDYGGR KKYVEWAGLD EPDEFYTNSA VKQFYKNHVK TVLTRKNTIT
201: GRMYKDDPTI FSWELINEPR CNDSTASNIL QDWVKEMASY VKSIDSNHLL EIGLEGFYGE SIPERTVYNP GGRVLTGTDF ITNNQIPDID FATIHIYPDS
301: WLPLQSSRTG EQDTFVDRWI GAHIEDCDNI IKKPLLITEF GKSSKYPGFS LEKRNKFFQR VYDVIYDSAR AGGSCTGGVF WQLTTNRTGL LGDGYEVFMQ
401: AGPNTTAQLI ADQSSKLKNL KYPPLVTHSA E

Arabidopsis Description

MAN1Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8AQX8]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.