Factsheet for TraesCS7B01G190600.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G225500.1	Wheat	vacuole	94.51	96.27
HORVU7Hr1G045910.1	Barley	vacuole	94.51	94.51
Os06t0311600-01	Rice	golgi, vacuole	83.07	82.5
TraesCS7A01G223800.1	Wheat	cytosol	74.14	81.61
OQU76322	Sorghum	golgi, vacuole	78.95	78.77
Zm00001d045873_P002	Maize	vacuole	77.57	77.93
GSMUA_Achr5P22340_001	Banana	cytosol	62.47	69.29
GSMUA_Achr8P24410_001	Banana	mitochondrion	51.95	64.67
VIT_00s0187g00280.t01	Wine grape	golgi, vacuole	58.58	57.02
PGSC0003DMT400034535	Potato	cytosol, nucleus, vacuole	51.03	56.46
VIT_00s0187g00320.t01	Wine grape	golgi, vacuole	58.12	56.32
Solyc11g012190.1.1	Tomato	golgi, vacuole	53.32	50.98
PGSC0003DMT400034545	Potato	cytosol	21.97	46.83
TraesCS3B01G307900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	46.0	45.27
TraesCS3B01G269200.1	Wheat	extracellular	38.9	40.0
TraesCS6B01G363800.1	Wheat	golgi, vacuole	36.38	39.55
TraesCS5B01G145200.1	Wheat	mitochondrion, plasma membrane, vacuole	36.84	38.33
TraesCS6B01G363700.1	Wheat	golgi, vacuole	36.61	37.47
TraesCS6B01G363900.1	Wheat	endoplasmic reticulum, extracellular, vacuole	34.55	36.56
TraesCS5B01G504000.1	Wheat	extracellular, golgi, vacuole	36.16	33.47

Protein Annotations

EnsemblPlants:TraesCS7B01G190600.1	EnsemblPlantsGene:TraesCS7B01G190600	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_5	InterPro:Glycoside_hydrolase_SF
PANTHER:PTHR31451	PANTHER:PTHR31451:SF1	PFAM:PF00150	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF51445
TMHMM:TMhelix	MapMan:21.2.3.2.2	:	:	:	:

Description

No Description!

Coordinates

chr7B:+:327631948..327637792

Molecular Weight (calculated)

49268.8 Da

IEP (calculated)

7.320

GRAVY (calculated)

-0.192

Length

437 amino acids

Sequence
(BLAST)

001: MRREKRLYSF LGLLLLLAVV YLNWLPGRDP AAPGGGGLKL PVPWLQPRMS FAGRNGTHFV DADTGAPLYV NGWNSYWLLS SRSPALVSEM LRRGRIMGLA
101: VCRTWAFIDG GPGALQISPG RFNEAVFQVL DYIIYEARRN HIRLILCLVN NLDNFGGKTQ YVKWAQAAGA NLTNSTDSFF YDPTVKGYYK DYVKAILTRR
201: NSYSGIRYSD EPAIFAWELM NEPRCVSNAS GPHLQAWIAE MAAYVKSLDA KHLVAVGIEG FYGTGIAERL GFNPGDWAAS LCSDFIQNSA VENIDFASVH
301: AYPDSWLPKA SMEEKLRYIS SWVDSHLNDS EHILKKPVLF SEVGYLQHVD GNSTVDRDIL LRVVYDKIYD SARKLQAGGG ALIWQLMVEG THMYHDDFSL
401: VARDHPSTYK LIMEQSCRLQ TLYKNDRDPD WQCPIQP

Best Arabidopsis Sequence Match ( AT4G28320.1 )
(BLAST)

001: MVPTRNRPML RILGFFICAA FIYLSFRDLW LNHKGKAKLG FVKRNGTQFV VDDKPLYVNG WNSYWFMDHA VDEHSRNLVG EMLEAGAKMG LTVCRTWAFN
101: DGGYNALQIS PGRFDERVFQ ALDHVIAEAR KHDVRLLLSL VNNLQAYGGK TQYVKWAWQE GVGLSSSNDS FFFDPSIRNY FKNYLKVLLT RKNSVTGIEY
201: RNDPTIFAWE LINEPRCTTD VSGKTLQDWI DEMTGFIKSI DDKHLLTVGL EGFYGPNSPK GLTVNPEQWA SQLGTDFVQN SNSSNIDFAS VHIYPDHWFH
301: NQTFEEKLKF VVKWMQSHIE DGLKELKKPV LFTEFGLSNQ NKDYEPSQRD KFYRIIFDVV YKSAKRKKSG AGTLVWQLFM EGMETFNDDF GIVPHEQDSI
401: YKLMIEQSCR LGKVTGRLKE QKLKELCSHR H

Arabidopsis Description

MAN5Mannan endo-1,4-beta-mannosidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0H6]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.