Factsheet for Zm00001d045873_P002

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 5
plasma membrane 3
golgi 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU76322	Sorghum	golgi, vacuole	90.8	90.18
TraesCS7D01G225500.1	Wheat	vacuole	78.39	79.49
Os06t0311600-01	Rice	golgi, vacuole	79.08	78.18
HORVU7Hr1G045910.1	Barley	vacuole	78.16	77.8
TraesCS7B01G190600.1	Wheat	vacuole	77.93	77.57
GSMUA_Achr5P22340_001	Banana	cytosol	60.92	67.26
TraesCS7A01G223800.1	Wheat	cytosol	60.69	66.5
GSMUA_Achr8P24410_001	Banana	mitochondrion	51.26	63.53
VIT_00s0187g00280.t01	Wine grape	golgi, vacuole	60.0	58.13
VIT_00s0187g00320.t01	Wine grape	golgi, vacuole	59.54	57.43
PGSC0003DMT400034535	Potato	cytosol, nucleus, vacuole	49.43	54.43
Solyc11g012190.1.1	Tomato	golgi, vacuole	51.49	49.02
Zm00001d043443_P001	Maize	plasma membrane	47.59	45.7
PGSC0003DMT400034545	Potato	cytosol	21.15	44.88
Zm00001d043965_P001	Maize	extracellular, vacuole	40.0	40.85
Zm00001d005052_P002	Maize	plasma membrane	35.63	35.8
Zm00001d052158_P001	Maize	golgi, vacuole	36.09	35.44
Zm00001d034723_P001	Maize	vacuole	35.63	32.29
Zm00001d035149_P001	Maize	vacuole	36.09	31.46
Zm00001d035984_P001	Maize	cytosol	11.72	26.15

Protein Annotations

EntrezGene:103638326	MapMan:21.2.3.2.2	Gene3D:3.20.20.80	UniProt:A0A1D6NZL6	ProteinID:AQL03344.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0016798	InterPro:Glyco_hydro_5	InterPro:Glycoside_hydrolase_SF	PFAM:PF00150	PANTHER:PTHR31451	PANTHER:PTHR31451:SF1
SUPFAM:SSF51445	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004DEBABA	EnsemblPlantsGene:Zm00001d045873	EnsemblPlants:Zm00001d045873_P002
EnsemblPlants:Zm00001d045873_T002	SEG:seg	:	:	:	:

Description

Putative endo-1%2C4-beta-mannosidase family protein

Coordinates

chr9:+:45038209..45051574

Molecular Weight (calculated)

49045.7 Da

IEP (calculated)

8.242

GRAVY (calculated)

-0.228

Length

435 amino acids

Sequence
(BLAST)

001: MWRGTRMYSL LGVLLLLALA YLNWHPGHGP SAGGPGGFKL PMPWLQPRMS FVGRAGTHFV DTLTGAPIYI NGWNSYWLLS ARSPSLSVEM LRRGRRMGLT
101: ICRTWAFSDG GPGALQISPG RFSEPVFQML DYVIYESRRN HVRLILCLVN NLDNFGGKAQ YVQWAQAAGV NVTNSTDSFF FHPTIKGYYM EYVKAILTRR
201: NTYSGIKYCD EPAIFAWELM NEPRCVSNSS GPYIQSWIEE MAAYIKSLDR KHLITVGTEG FYGPGRGERL GVNPGDWAAS VCSDFIQNSA VKDIDFASVH
301: AYPDSWLPKA SMEEKVKYLS VWVDSHLNDS EYVLRKPVLF TEVGYLQHAE ANSTVDGDIL LKVVYDKLYD SAKKLQAGSG ALIWQLMVEG TQMYHDDFSM
401: VARDRPSTYK LMKEQSCRLQ SLYGKEGDPT WKCSP

Best Arabidopsis Sequence Match ( AT4G28320.1 )
(BLAST)

001: MVPTRNRPML RILGFFICAA FIYLSFRDLW LNHKGKAKLG FVKRNGTQFV VDDKPLYVNG WNSYWFMDHA VDEHSRNLVG EMLEAGAKMG LTVCRTWAFN
101: DGGYNALQIS PGRFDERVFQ ALDHVIAEAR KHDVRLLLSL VNNLQAYGGK TQYVKWAWQE GVGLSSSNDS FFFDPSIRNY FKNYLKVLLT RKNSVTGIEY
201: RNDPTIFAWE LINEPRCTTD VSGKTLQDWI DEMTGFIKSI DDKHLLTVGL EGFYGPNSPK GLTVNPEQWA SQLGTDFVQN SNSSNIDFAS VHIYPDHWFH
301: NQTFEEKLKF VVKWMQSHIE DGLKELKKPV LFTEFGLSNQ NKDYEPSQRD KFYRIIFDVV YKSAKRKKSG AGTLVWQLFM EGMETFNDDF GIVPHEQDSI
401: YKLMIEQSCR LGKVTGRLKE QKLKELCSHR H

Arabidopsis Description

MAN5Mannan endo-1,4-beta-mannosidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0H6]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.