Factsheet for VIT_00s0187g00320.t01

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

plastid 1
vacuole 4
cytosol 1
extracellular 3
endoplasmic reticulum 3
plasma membrane 3
golgi 4
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	plastid
MultiLoc:	vacuole
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0187g00280.t01	Wine grape	golgi, vacuole	97.34	97.77
PGSC0003DMT400034535	Potato	cytosol, nucleus, vacuole	59.65	68.1
GSMUA_Achr5P22340_001	Banana	cytosol	56.32	64.47
Solyc11g012190.1.1	Tomato	golgi, vacuole	64.08	63.24
GSMUA_Achr8P24410_001	Banana	mitochondrion	47.45	60.97
TraesCS7D01G225500.1	Wheat	vacuole	57.21	60.14
Zm00001d045873_P002	Maize	vacuole	57.43	59.54
OQU76322	Sorghum	golgi, vacuole	57.65	59.36
HORVU7Hr1G045910.1	Barley	vacuole	56.76	58.58
Os06t0311600-01	Rice	golgi, vacuole	56.76	58.18
TraesCS7B01G190600.1	Wheat	vacuole	56.32	58.12
PGSC0003DMT400034545	Potato	cytosol	25.5	56.1
TraesCS7A01G223800.1	Wheat	cytosol	45.9	52.14
VIT_12s0028g03610.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	49.0	51.16
VIT_18s0089g00180.t01	Wine grape	vacuole	33.48	44.54
VIT_18s0089g00190.t01	Wine grape	extracellular, vacuole	39.25	44.03
VIT_18s0089g00170.t01	Wine grape	vacuole	38.36	42.93
VIT_18s0089g00160.t01	Wine grape	vacuole	37.92	42.43
VIT_08s0058g01460.t01	Wine grape	cytosol, nucleus, plastid, vacuole	37.92	41.91
VIT_04s0023g02130.t01	Wine grape	vacuole	39.69	41.34
VIT_18s0089g00200.t01	Wine grape	vacuole	37.69	41.06
VIT_18s0001g12830.t01	Wine grape	extracellular, vacuole	38.36	39.95
VIT_18s0089g00140.t01	Wine grape	cytosol, peroxisome, plastid, vacuole	36.59	39.38
VIT_08s0058g01480.t01	Wine grape	cytosol, mitochondrion, vacuole	38.8	39.06

Protein Annotations

EntrezGene:100853473	wikigene:100853473	EntrezGene:104878119	MapMan:21.2.3.2.2	Gene3D:3.20.20.80	EMBL:AM426912
ProteinID:CAN77937	ProteinID:CAN77937.1	ProteinID:CBI33121	ProteinID:CBI33121.3	UniProt:D7TRJ6	EMBL:FN596025
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016798	GO:GO:0016985	GO:GO:0046355	InterPro:Glyco_hydro_5	InterPro:Glycoside_hydrolase_SF	EntrezGene:LOC100853473
wikigene:LOC100853473	PFAM:PF00150	PANTHER:PTHR31451	PANTHER:PTHR31451:SF1	SUPFAM:SSF51445	TIGR:TC54113
TIGR:TC56052	TMHMM:TMhelix	UniParc:UPI00015CDAD3	ArrayExpress:VIT_00s0187g00320	EnsemblPlantsGene:VIT_00s0187g00320	EnsemblPlants:VIT_00s0187g00320.t01
unigene:Vvi.8932	RefSeq:XP_003635019	RefSeq:XP_003635019.1	RefSeq:XP_010646197.1	SEG:seg	:

Description

No Description!

Coordinates

chrUn:-:9242402..9246169

Molecular Weight (calculated)

51080.3 Da

IEP (calculated)

5.646

GRAVY (calculated)

-0.255

Length

451 amino acids

Sequence
(BLAST)

001: MEGEWKQKRL YPLLGTLSIL LFLYFNFSDY FNFPVLWLPA IGFVGTNSTK FVIVEPDGSH QSTLYINGWN SYWLMEESVW GPSRSRVSNM LRRGAEMGMS
101: VCRTWAFNDG DGPNSLQISP GVFNERVFQG LDYVIFEARR HQVRLILSLV NNLNAYGGKA QYVRWAQEAG INVSSSTDSF FSHPTIKDYY KAYIKAVVTR
201: KNSLSGVKYS EEPAIFGWEL MNEPRCASSS SAPILQAWIT EMAAFIKSLD QKHLVTVGLE GFYGLKTTER SGVNPGDWAS KLGSDFIQNS AIDDIDFASV
301: HAYPDSWLPD ADLEEKANFL SHWVDSHISD GEYVLKKPVL FTEVGSIMHR KKQGLYDTDT FLKTVYDKIY ESAKKRQAGA GAGALIWQLL VEGMEEYSDQ
401: FSIVAWDYPS THELIIEQSC RLRSVFAEGQ VERKLQHGDL CFGKVFNNSN E

Best Arabidopsis Sequence Match ( AT2G20680.1 )
(BLAST)

001: MAAPTGNGPV IPILGFLTCV AFIYLSFGDL WFGLKTEGEL AFVKRNGTQF VVDGKALYVN GWNSYWFMDH AVNDHSRHRV SAMLEAGAKM GLTVCRTWAF
101: NDGGYNALQI SPGRFDERVF KALDHVIAEA KTHGVRLLLS LVNNLQAYGG KTQYVNWAWQ EGVGLSSSND SFFFDPSIRR YFKNYLTVLL TRKNSLTGIE
201: YRNDPTIFAW ELINEPRCMS DVSGDTLQDW INEMTAFIKS IDNKHLLTVG LEGFYGPSSP KKLTVNPERW ASELGSDFVR NSDSPNIDFA SVHIYPDHWF
301: HDQGFEEKLK FVVKWMLSHI EDGDKELKKP VLFTEFGLSN LNKDYDPSQR DRFYRTIFDV IYKSAKRKRS GAGTLVWQFL IEGMEGFNDD FGIVPWEQDS
401: IQRLMIEQSC RLSRITGRHL LDKKSIEMCS HRP

Arabidopsis Description

MAN2Mannan endo-1,4-beta-mannosidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q7Y223]
SUBAcon: [plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.