Factsheet for Solyc11g012190.1.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

plastid 2
mitochondrion 1
vacuole 4
cytosol 1
extracellular 3
endoplasmic reticulum 3
plasma membrane 3
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	vacuole
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400034535	Potato	cytosol, nucleus, vacuole	83.59	96.71
PGSC0003DMT400034545	Potato	cytosol	37.2	82.93
VIT_00s0187g00280.t01	Wine grape	golgi, vacuole	63.46	64.59
VIT_00s0187g00320.t01	Wine grape	golgi, vacuole	63.24	64.08
GSMUA_Achr5P22340_001	Banana	cytosol	52.95	61.42
GSMUA_Achr8P24410_001	Banana	mitochondrion	45.3	58.97
TraesCS7D01G225500.1	Wheat	vacuole	51.42	54.78
TraesCS7B01G190600.1	Wheat	vacuole	50.98	53.32
HORVU7Hr1G045910.1	Barley	vacuole	50.55	52.86
Zm00001d045873_P002	Maize	vacuole	49.02	51.49
Os06t0311600-01	Rice	golgi, vacuole	49.45	51.36
OQU76322	Sorghum	golgi, vacuole	48.8	50.91
TraesCS7A01G223800.1	Wheat	cytosol	42.01	48.36
Solyc07g053920.2.1	Tomato	vacuole	45.51	47.17
Solyc10g008300.2.1	Tomato	golgi, mitochondrion, vacuole	45.51	46.85
Solyc12g013770.1.1	Tomato	vacuole	29.98	43.35
Solyc06g064520.2.1	Tomato	vacuole	37.86	41.79
Solyc01g008720.1.1	Tomato	extracellular, golgi, vacuole	36.54	41.65
Solyc04g080620.2.1	Tomato	endoplasmic reticulum, vacuole	37.2	41.16
Solyc01g008710.2.1	Tomato	extracellular	35.45	40.6
Solyc02g084990.2.1	Tomato	nucleus	38.51	40.55
Solyc12g013670.1.1	Tomato	cytosol	15.1	38.98
Solyc10g074920.1.1	Tomato	extracellular	36.98	37.64
Solyc12g013750.1.1	Tomato	cytosol	8.1	35.58
Solyc12g013760.1.1	Tomato	cytosol	4.6	30.43

Protein Annotations

MapMan:21.2.3.2.2	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016798	GO:GO:0016985	GO:GO:0046355	InterPro:Glyco_hydro_5
InterPro:Glycoside_hydrolase_SF	UniProt:K4D624	PFAM:PF00150	PANTHER:PTHR31451	PANTHER:PTHR31451:SF1	SUPFAM:SSF51445
EnsemblPlantsGene:Solyc11g012190.1	EnsemblPlants:Solyc11g012190.1.1	TMHMM:TMhelix	UniParc:UPI0002769F5B	SEG:seg	:

Description

No Description!

Coordinates

chr11:+:5108252..5112002

Molecular Weight (calculated)

52141.3 Da

IEP (calculated)

9.442

GRAVY (calculated)

-0.234

Length

457 amino acids

Sequence
(BLAST)

001: MDTQWRWRDK KLYPAFGIFT IFFLLYLSFN DNFNFNFNFP QIFVTQPYMG FVGVNETRFF IKNENPKTQS LSFKDLYING WNSYWLMEES VWVSSRFRVS
101: KMLKRGAEMG LSVCRTWAFS DGGGPNDLQL LPGVFNERVF KGLDFVIVEA RKHNIRLILS LVNNLKAYGG TAQYMRWARE AGTNVSSSRD AFFTNPTVKA
201: YYKSFVKAIV TRKNSLSGVK YSEEPAIFAW ELINEPRCES SSSAAALQVW IAEMAGFVKS LDQKHLVTIG LEGFYGAEKT ENVGLNPGKW AESLGVDFIE
301: NSAIENIDFT SVHAYPHSWI KGGINSDARL DFLSHWVDSH ISEAEKILKK PVLFTEVGFP SSIQKNGLYD RNIFLKIVYE KIYESAKKKK AGAGALVWQL
401: LVEGMERYGD QFSFIAWKHP STYKLMVEQS CRLLNISSQG LTDKKLNQKN HCSANAS

Best Arabidopsis Sequence Match ( AT4G28320.1 )
(BLAST)

001: MVPTRNRPML RILGFFICAA FIYLSFRDLW LNHKGKAKLG FVKRNGTQFV VDDKPLYVNG WNSYWFMDHA VDEHSRNLVG EMLEAGAKMG LTVCRTWAFN
101: DGGYNALQIS PGRFDERVFQ ALDHVIAEAR KHDVRLLLSL VNNLQAYGGK TQYVKWAWQE GVGLSSSNDS FFFDPSIRNY FKNYLKVLLT RKNSVTGIEY
201: RNDPTIFAWE LINEPRCTTD VSGKTLQDWI DEMTGFIKSI DDKHLLTVGL EGFYGPNSPK GLTVNPEQWA SQLGTDFVQN SNSSNIDFAS VHIYPDHWFH
301: NQTFEEKLKF VVKWMQSHIE DGLKELKKPV LFTEFGLSNQ NKDYEPSQRD KFYRIIFDVV YKSAKRKKSG AGTLVWQLFM EGMETFNDDF GIVPHEQDSI
401: YKLMIEQSCR LGKVTGRLKE QKLKELCSHR H

Arabidopsis Description

MAN5Mannan endo-1,4-beta-mannosidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0H6]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.