Factsheet for Solyc12g013770.1.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 8
plasma membrane 5
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400039828	Potato	cytosol	19.3	96.83
PGSC0003DMT400092618	Potato	extracellular	38.92	95.35
PGSC0003DMT400093759	Potato	cytosol	35.76	91.87
PGSC0003DMT400039596	Potato	vacuole	87.34	82.63
PGSC0003DMT400039582	Potato	vacuole	53.8	77.98
Solyc06g064520.2.1	Tomato	vacuole	75.95	57.97
GSMUA_Achr6P12740_001	Banana	extracellular, vacuole	44.3	55.78
VIT_18s0089g00200.t01	Wine grape	vacuole	62.34	47.58
KRH39855	Soybean	vacuole	61.08	47.42
KRH23949	Soybean	vacuole	60.44	46.93
GSMUA_Achr6P28970_001	Banana	extracellular, golgi	32.59	46.82
GSMUA_Achr9P08250_001	Banana	vacuole	60.76	42.67
GSMUA_Achr6P12730_001	Banana	golgi, vacuole	55.38	42.58
Solyc04g080620.2.1	Tomato	endoplasmic reticulum, vacuole	51.58	39.47
Solyc01g008720.1.1	Tomato	extracellular, golgi, vacuole	49.68	39.15
Solyc01g008710.2.1	Tomato	extracellular	47.47	37.59
Solyc12g013670.1.1	Tomato	cytosol	20.89	37.29
Solyc02g084990.2.1	Tomato	nucleus	49.68	36.18
Solyc10g074920.1.1	Tomato	extracellular	46.2	32.52
Solyc10g008300.2.1	Tomato	golgi, mitochondrion, vacuole	43.67	31.08
Solyc11g012190.1.1	Tomato	golgi, vacuole	43.35	29.98
Solyc07g053920.2.1	Tomato	vacuole	41.46	29.71
Solyc12g013750.1.1	Tomato	cytosol	6.65	20.19
Solyc12g013760.1.1	Tomato	cytosol	0.0	0.0

Protein Annotations

MapMan:21.2.3.2.2	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0016798
GO:GO:0016985	GO:GO:0046355	InterPro:Glyco_hydro_5	InterPro:Glycoside_hydrolase_SF	UniProt:K4DCR2	PFAM:PF00150
PFscan:PS51257	PANTHER:PTHR31451	PANTHER:PTHR31451:SF15	SUPFAM:SSF51445	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc12g013770.1
EnsemblPlants:Solyc12g013770.1.1	UniParc:UPI000276A4B7	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr12:-:4582233..4583505

Molecular Weight (calculated)

35659.1 Da

IEP (calculated)

5.629

GRAVY (calculated)

-0.268

Length

316 amino acids

Sequence
(BLAST)

001: MSYTHRRSCI SGLFLLLLAL SCEANSGFIG VKDSHFELNG SPFLFNGFNS YWLMHVAADP AERYKVTEVL KDASTAGLSV CRTWAFSDGG DRALQISPGV
101: YDERVFQGLD FVIAEAKKYG VRLILSFVNQ WNDFGGKAEY VWWARNAGVQ ISNDDEFYTH PILKKYLKNH IEKVVTRLNS ITKVAYKDDA TIMAWELMNE
201: PRDQADYSGK TVNGWVQEMA SFVKSLDNKH LLEVGMEGFY GDSIPERKLV NPGYQVGTDF ISNHLINEID FATIHAYTDQ WLSGQSDEAQ LAVDGKVDKK
301: SLGRCKKYIE ETFSAC

Best Arabidopsis Sequence Match ( AT1G02310.1 )
(BLAST)

001: MLNILPFFLF FLPFLIGNNR ICVAVKTGFV GRNGTQFVLN GEQVYLNGFN AYWMMTTAAD TASKGRATVT TALRQASAVG MNVARIWGFN EGDYIPLQIS
101: PGSYSEDVFK GLDFVVYEAG RFNIKLIISL VNNFEDYGGR KKYVEWAGLD EPDEFYTNSA VKQFYKNHVK TVLTRKNTIT GRMYKDDPTI FSWELINEPR
201: CNDSTASNIL QDWVKEMASY VKSIDSNHLL EIGLEGFYGE SIPERTVYNP GGRVLTGTDF ITNNQIPDID FATIHIYPDS WLPLQSSRTG EQDTFVDRWI
301: GAHIEDCDNI IKKPLLITEF GKSSKYPGFS LEKRNKFFQR VYDVIYDSAR AGGSCTGGVF WQLTTNRTGL LGDGYEVFMQ AGPNTTAQLI ADQSSKLKNL
401: KYPPLVTHSA E

Arabidopsis Description

MAN1Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8AQX8]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.