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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 3
  • mitochondrion 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, secretory
BaCelLo:secretory
MultiLoc:cytosol
Plant-mPloc:cytosol, extracellular
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400083217 Potato cytosol 92.06 31.35
PGSC0003DMT400092800 Potato peroxisome 96.83 30.05
PGSC0003DMT400039735 Potato cytosol 98.41 19.81
Solyc12g013770.1.1 Tomato vacuole 96.83 19.3
PGSC0003DMT400039596 Potato vacuole 96.83 18.26
GSMUA_Achr6P12740_001 Banana extracellular, vacuole 58.73 14.74
PGSC0003DMT400034545 Potato cytosol 44.44 13.66
PGSC0003DMT400090248 Potato cytosol 53.97 12.45
VIT_18s0089g00200.t01 Wine grape vacuole 79.37 12.08
KRH39855 Soybean vacuole 77.78 12.04
KRH23949 Soybean vacuole 76.19 11.79
PGSC0003DMT400095096 Potato cytosol 53.97 11.04
GSMUA_Achr9P08250_001 Banana vacuole 74.6 10.44
PGSC0003DMT400009479 Potato cytosol, nucleus, peroxisome 58.73 9.76
GSMUA_Achr6P12730_001 Banana golgi, vacuole 61.9 9.49
PGSC0003DMT400009055 Potato extracellular, golgi, vacuole 60.32 8.78
PGSC0003DMT400034535 Potato cytosol, nucleus, vacuole 49.21 7.85
PGSC0003DMT400034196 Potato golgi, mitochondrion, plastid, vacuole 53.97 7.66
PGSC0003DMT400080203 Potato endoplasmic reticulum 52.38 7.35
PGSC0003DMT400047236 Potato vacuole 47.62 6.8
PGSC0003DMT400039582 Potato vacuole 11.11 3.21
GSMUA_Achr6P28970_001 Banana extracellular, golgi 4.76 1.36
PGSC0003DMT400092618 Potato extracellular 0.0 0.0
PGSC0003DMT400093759 Potato cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:PGSC0003DMT400039828EnsemblPlantsGene:PGSC0003DMG400015397Gene3D:3.20.20.80InterPro:Glycoside_hydrolase_SFPANTHER:PTHR31451PANTHER:PTHR31451:SF15
PGSC:PGSC0003DMG400015397SUPFAM:SSF51445UniParc:UPI000295848AUniProt:M1B8U8MapMan:35.1:
Description
Mannan endo-1,4-beta-mannosidase 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400015397]
Coordinates
chr12:-:699754..700604
Molecular Weight (calculated)
7196.4 Da
IEP (calculated)
4.848
GRAVY (calculated)
-0.275
Length
63 amino acids
Sequence
(BLAST)
1: MASFVKSLDN KHLLEVGMEG FYGDSIPERK SVNPGYQVGT YFISNHLINE IDFATIHAYT DQW
Best Arabidopsis Sequence Match ( AT1G02310.1 )
(BLAST)
001: MLNILPFFLF FLPFLIGNNR ICVAVKTGFV GRNGTQFVLN GEQVYLNGFN AYWMMTTAAD TASKGRATVT TALRQASAVG MNVARIWGFN EGDYIPLQIS
101: PGSYSEDVFK GLDFVVYEAG RFNIKLIISL VNNFEDYGGR KKYVEWAGLD EPDEFYTNSA VKQFYKNHVK TVLTRKNTIT GRMYKDDPTI FSWELINEPR
201: CNDSTASNIL QDWVKEMASY VKSIDSNHLL EIGLEGFYGE SIPERTVYNP GGRVLTGTDF ITNNQIPDID FATIHIYPDS WLPLQSSRTG EQDTFVDRWI
301: GAHIEDCDNI IKKPLLITEF GKSSKYPGFS LEKRNKFFQR VYDVIYDSAR AGGSCTGGVF WQLTTNRTGL LGDGYEVFMQ AGPNTTAQLI ADQSSKLKNL
401: KYPPLVTHSA E
Arabidopsis Description
MAN1Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8AQX8]
SUBAcon: [golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.