Factsheet for PGSC0003DMT400047236

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 1
extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g053920.2.1	Tomato	vacuole	97.96	97.96
PGSC0003DMT400034196	Potato	golgi, mitochondrion, plastid, vacuole	82.99	82.43
Bra036494.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	48.07	73.36
VIT_12s0028g03610.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	70.52	71.99
Bra031137.1-P	Field mustard	golgi, vacuole	68.48	69.91
CDY13860	Canola	golgi, vacuole	68.48	69.91
CDY05783	Canola	extracellular, plasma membrane, vacuole	68.25	69.84
CDX81978	Canola	golgi, vacuole	68.25	69.68
AT2G20680.1	Thale cress	plasma membrane, vacuole	68.25	69.52
Bra036493.1-P	Field mustard	vacuole	66.44	69.27
CDY31945	Canola	vacuole	66.44	69.27
AT4G28320.1	Thale cress	vacuole	66.67	68.21
KRH22381	Soybean	vacuole	65.99	67.99
KRH26952	Soybean	extracellular, plasma membrane, vacuole	65.76	67.76
CDY18983	Canola	vacuole	64.63	66.13
Bra026266.1-P	Field mustard	vacuole	64.63	66.13
CDX89187	Canola	vacuole	64.63	66.13
KRH25580	Soybean	mitochondrion	65.31	66.06
KRH55954	Soybean	mitochondrion, vacuole	65.08	65.83
GSMUA_Achr5P09360_001	Banana	endoplasmic reticulum, extracellular, vacuole	56.01	63.01
GSMUA_Achr1P04970_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	61.68	62.39
TraesCS3B01G307900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	57.14	56.76
TraesCS3A01G274200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	57.14	56.76
Os01t0746700-00	Rice	endoplasmic reticulum, plasma membrane, vacuole	56.92	56.4
TraesCS3D01G273400.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	56.92	56.4
GSMUA_Achr8P20030_001	Banana	golgi, plastid, vacuole	57.14	56.25
Zm00001d043443_P001	Maize	plasma membrane	57.37	55.85
EES03598	Sorghum	endoplasmic reticulum, vacuole	57.6	55.1
HORVU3Hr1G071210.3	Barley	extracellular, plasma membrane, vacuole	58.28	54.91
GSMUA_Achr10P...	Banana	nucleus, plasma membrane, plastid, vacuole	58.05	53.11
PGSC0003DMT400034535	Potato	cytosol, nucleus, vacuole	43.99	49.11
PGSC0003DMT400092800	Potato	peroxisome	22.22	48.28
PGSC0003DMT400039828	Potato	cytosol	6.8	47.62
PGSC0003DMT400095096	Potato	cytosol	32.43	46.43
PGSC0003DMT400039735	Potato	cytosol	31.97	45.05
PGSC0003DMT400009479	Potato	cytosol, nucleus, peroxisome	38.55	44.85
PGSC0003DMT400093759	Potato	cytosol	12.47	44.72
PGSC0003DMT400090248	Potato	cytosol	27.66	44.69
PGSC0003DMT400092618	Potato	extracellular	12.93	44.19
PGSC0003DMT400039596	Potato	vacuole	31.75	41.92
PGSC0003DMT400009055	Potato	extracellular, golgi, vacuole	39.91	40.65
PGSC0003DMT400080203	Potato	endoplasmic reticulum	40.82	40.09
PGSC0003DMT400034545	Potato	cytosol	18.14	39.02
PGSC0003DMT400083217	Potato	cytosol	14.97	35.68
PGSC0003DMT400039582	Potato	vacuole	17.23	34.86

Protein Annotations

EntrezGene:102592832	MapMan:21.2.3.2.2	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005575	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016798	InterPro:Glyco_hydro_5	InterPro:Glycoside_hydrolase_SF	UniProt:M1BKC5	PFAM:PF00150
EnsemblPlantsGene:PGSC0003DMG400018338	PGSC:PGSC0003DMG400018338	EnsemblPlants:PGSC0003DMT400047236	PANTHER:PTHR31451	PANTHER:PTHR31451:SF1	SUPFAM:SSF51445
TMHMM:TMhelix	UniParc:UPI0002968ED3	RefSeq:XP_006357475.1	:	:	:

Description

Endo-beta-mannanase [Source:PGSC_GENE;Acc:PGSC0003DMG400018338]

Coordinates

chr7:+:49235596..49239694

Molecular Weight (calculated)

50983.6 Da

IEP (calculated)

8.509

GRAVY (calculated)

-0.351

Length

441 amino acids

Sequence
(BLAST)

001: MVKSSMSRML AGNGLFYPII GFASFIAFLY LSFGDLWVNY SKEINLSFVE RNGTQFFVDG KVFYINGWNS YWLMDHAADY NTRPRIRTIL QAGAKMGLTV
101: CRTWAFNDAG YNALQISPGK FDEKVFRALD HVIAEARRNG IRLLLSLVNN LQAYGGKTQY VKWAWEEGVA LSSSNDSFFY DPSIRRYFKS YVKTVLTRRN
201: IYTGIEYRDD PTIFAWELIN EPRCMTDPSG DTLQDWIEEM STFVKSIDRK HLLTVGLEGF YGPKSPKKTT ANPEIWAADL GSDFVRNSIL STVDFASVHV
301: YPDHWFHHKN FEEMLKFAAK WMLSHIEDGD KELKKPVLFT EFGLSNDNDD FEPAQRDRFL KMVLDVLYKS AKRNKSGAGS FFWQFLAEKM ERFNDEYGVV
401: PWESPSTYRL ITQQSCRLAK VQGLHSTQIE NVKNFCASRR N

Best Arabidopsis Sequence Match ( AT2G20680.1 )
(BLAST)

001: MAAPTGNGPV IPILGFLTCV AFIYLSFGDL WFGLKTEGEL AFVKRNGTQF VVDGKALYVN GWNSYWFMDH AVNDHSRHRV SAMLEAGAKM GLTVCRTWAF
101: NDGGYNALQI SPGRFDERVF KALDHVIAEA KTHGVRLLLS LVNNLQAYGG KTQYVNWAWQ EGVGLSSSND SFFFDPSIRR YFKNYLTVLL TRKNSLTGIE
201: YRNDPTIFAW ELINEPRCMS DVSGDTLQDW INEMTAFIKS IDNKHLLTVG LEGFYGPSSP KKLTVNPERW ASELGSDFVR NSDSPNIDFA SVHIYPDHWF
301: HDQGFEEKLK FVVKWMLSHI EDGDKELKKP VLFTEFGLSN LNKDYDPSQR DRFYRTIFDV IYKSAKRKRS GAGTLVWQFL IEGMEGFNDD FGIVPWEQDS
401: IQRLMIEQSC RLSRITGRHL LDKKSIEMCS HRP

Arabidopsis Description

MAN2Mannan endo-1,4-beta-mannosidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q7Y223]
SUBAcon: [plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.