Factsheet for TraesCS3A01G274200.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G307900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	97.75	97.75
TraesCS3D01G273400.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	97.07	96.85
HORVU3Hr1G071210.3	Barley	extracellular, plasma membrane, vacuole	94.37	89.53
Os01t0746700-00	Rice	endoplasmic reticulum, plasma membrane, vacuole	76.35	76.18
Zm00001d043443_P001	Maize	plasma membrane	75.0	73.51
EES03598	Sorghum	endoplasmic reticulum, vacuole	74.77	72.02
Bra036494.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	42.34	65.05
GSMUA_Achr5P09360_001	Banana	endoplasmic reticulum, extracellular, vacuole	56.31	63.78
GSMUA_Achr1P04970_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	61.49	62.61
Bra036493.1-P	Field mustard	vacuole	57.66	60.52
CDY31945	Canola	vacuole	57.66	60.52
CDY05783	Canola	extracellular, plasma membrane, vacuole	57.66	59.4
AT4G28320.1	Thale cress	vacuole	57.43	59.16
AT2G20680.1	Thale cress	plasma membrane, vacuole	57.66	59.12
CDY13860	Canola	golgi, vacuole	57.21	58.8
Bra031137.1-P	Field mustard	golgi, vacuole	57.21	58.8
CDX81978	Canola	golgi, vacuole	56.98	58.56
VIT_12s0028g03610.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	56.53	58.1
Solyc07g053920.2.1	Tomato	vacuole	57.21	57.6
CDY18983	Canola	vacuole	55.86	57.54
CDX89187	Canola	vacuole	55.63	57.31
Bra026266.1-P	Field mustard	vacuole	55.63	57.31
PGSC0003DMT400047236	Potato	vacuole	56.76	57.14
PGSC0003DMT400034196	Potato	golgi, mitochondrion, plastid, vacuole	56.98	56.98
Solyc10g008300.2.1	Tomato	golgi, mitochondrion, vacuole	56.31	56.31
KRH22381	Soybean	vacuole	54.05	56.07
KRH26952	Soybean	extracellular, plasma membrane, vacuole	54.05	56.07
GSMUA_Achr8P20030_001	Banana	golgi, plastid, vacuole	55.86	55.36
KRH25580	Soybean	mitochondrion	54.28	55.28
KRH55954	Soybean	mitochondrion, vacuole	54.05	55.05
GSMUA_Achr10P...	Banana	nucleus, plasma membrane, plastid, vacuole	57.43	52.9
TraesCS5A01G146400.1	Wheat	mitochondrion, plasma membrane, plastid, vacuole	43.02	45.48
TraesCS3A01G241000.1	Wheat	golgi, vacuole	39.64	41.41
TraesCS6A01G333400.1	Wheat	golgi, vacuole	39.19	41.04
TraesCS7A01G223800.1	Wheat	cytosol	35.81	40.05
TraesCS6A01G333300.1	Wheat	golgi, vacuole	38.06	39.67
TraesCS6A01G333500.1	Wheat	extracellular, vacuole	36.49	39.23
TraesCS4A01G368600.1	Wheat	endoplasmic reticulum, golgi, vacuole	36.04	33.97

Protein Annotations

EnsemblPlants:TraesCS3A01G274200.1	EnsemblPlantsGene:TraesCS3A01G274200	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_5	InterPro:Glyco_hydro_5_CS
InterPro:Glycoside_hydrolase_SF	PANTHER:PTHR31451	PANTHER:PTHR31451:SF1	PFAM:PF00150	ScanProsite:PS00659	SUPFAM:SSF51445
TMHMM:TMhelix	MapMan:21.2.3.2.2	:	:	:	:

Description

No Description!

Coordinates

chr3A:+:503025325..503027036

Molecular Weight (calculated)

49884.3 Da

IEP (calculated)

6.155

GRAVY (calculated)

-0.193

Length

444 amino acids

Sequence
(BLAST)

001: MAACNGLFVY HILGLASLLA VFYFSLLGEV DLRFPGLLPS PGASRSHDAS LPFVERRGAQ LFLEGRPFYI NGWNSYWLMD QAVEPASRHR VSDMFRAATG
101: MGLTVCRTWA FNDGAYNALQ LSPGHFDERV FKALDMVVVE ARRHGVRLIL SLANNLEAYG GKTQYVRWAW DEGVGLTASN DSFFFDPAIR DYFKVYLKAL
201: LTRTNHLTGV QYKDDPTILA WELMNEPRCI TDPSGNTLQR WIDEMAGYVK SIDRRHLLTV GTEGFYGPTS PPEKLSVNPG HWFNNYGLDF IRNSKISDID
301: FASVHLYPDT WLLDANLEEK LKFVTKWVSS HFEDGDTELG GKPVVLTEFG LSHLVKGFEQ SQRDAFYKSV YDIVHESAKR GGAGAGAIVW QLAAEDMEEY
401: HDGFAIVPSE TPSMQKLLTE QSCRLAALRH GEQEAKRILK AVCG

Best Arabidopsis Sequence Match ( AT2G20680.1 )
(BLAST)

001: MAAPTGNGPV IPILGFLTCV AFIYLSFGDL WFGLKTEGEL AFVKRNGTQF VVDGKALYVN GWNSYWFMDH AVNDHSRHRV SAMLEAGAKM GLTVCRTWAF
101: NDGGYNALQI SPGRFDERVF KALDHVIAEA KTHGVRLLLS LVNNLQAYGG KTQYVNWAWQ EGVGLSSSND SFFFDPSIRR YFKNYLTVLL TRKNSLTGIE
201: YRNDPTIFAW ELINEPRCMS DVSGDTLQDW INEMTAFIKS IDNKHLLTVG LEGFYGPSSP KKLTVNPERW ASELGSDFVR NSDSPNIDFA SVHIYPDHWF
301: HDQGFEEKLK FVVKWMLSHI EDGDKELKKP VLFTEFGLSN LNKDYDPSQR DRFYRTIFDV IYKSAKRKRS GAGTLVWQFL IEGMEGFNDD FGIVPWEQDS
401: IQRLMIEQSC RLSRITGRHL LDKKSIEMCS HRP

Arabidopsis Description

MAN2Mannan endo-1,4-beta-mannosidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q7Y223]
SUBAcon: [plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.