CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

cytosol 1
extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031137.1-P	Field mustard	golgi, vacuole	98.84	98.84
CDY13860	Canola	golgi, vacuole	98.84	98.84
CDY05783	Canola	extracellular, plasma membrane, vacuole	91.9	92.11
CDY31945	Canola	vacuole	89.81	91.73
AT2G20680.1	Thale cress	plasma membrane, vacuole	88.89	88.68
CDX89187	Canola	vacuole	80.32	80.51
CDY18983	Canola	vacuole	80.32	80.51
VIT_12s0028g03610.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	68.29	68.29
Solyc07g053920.2.1	Tomato	vacuole	69.68	68.25
PGSC0003DMT400047236	Potato	vacuole	69.68	68.25
KRH22381	Soybean	vacuole	66.9	67.52
KRH26952	Soybean	extracellular, plasma membrane, vacuole	66.44	67.06
KRH55954	Soybean	mitochondrion, vacuole	67.36	66.74
KRH25580	Soybean	mitochondrion	67.13	66.51
PGSC0003DMT400034196	Potato	golgi, mitochondrion, plastid, vacuole	67.82	65.99
Solyc10g008300.2.1	Tomato	golgi, mitochondrion, vacuole	67.59	65.77
GSMUA_Achr5P09360_001	Banana	endoplasmic reticulum, extracellular, vacuole	58.8	64.8
GSMUA_Achr1P04970_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	63.66	63.07
GSMUA_Achr8P20030_001	Banana	golgi, plastid, vacuole	59.26	57.14
TraesCS3A01G274200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	58.56	56.98
TraesCS3B01G307900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	58.1	56.53
TraesCS3D01G273400.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	57.64	55.96
Zm00001d043443_P001	Maize	plasma membrane	58.56	55.85
Os01t0746700-00	Rice	endoplasmic reticulum, plasma membrane, vacuole	57.41	55.73
EES03598	Sorghum	endoplasmic reticulum, vacuole	58.56	54.88
HORVU3Hr1G071210.3	Barley	extracellular, plasma membrane, vacuole	58.33	53.85
GSMUA_Achr10P...	Banana	nucleus, plasma membrane, plastid, vacuole	59.95	53.73
CDX73899	Canola	extracellular	28.7	43.51
CDY36280	Canola	endoplasmic reticulum, extracellular, vacuole	39.35	40.96
CDY15229	Canola	golgi, vacuole	38.66	40.93
CDX89985	Canola	golgi, vacuole	38.89	40.88
CDY11173	Canola	endoplasmic reticulum, vacuole	41.44	40.5
CDY45231	Canola	extracellular, vacuole	40.28	37.1
CDY61603	Canola	nucleus	36.34	22.27
CDY68324	Canola	endoplasmic reticulum, vacuole	40.74	21.39

Protein Annotations

EnsemblPlants:CDX81978	EnsemblPlantsGene:GSBRNA2T00136953001	Gene3D:3.20.20.80	GO:A0A078D3W3	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_5
InterPro:Glycoside_hydrolase_SF	PANTHER:PTHR31451	PANTHER:PTHR31451:SF1	PFAM:PF00150	ProteinID:CDX81978	ProteinID:CDX81978.1
SEG:seg	SUPFAM:SSF51445	TMHMM:TMhelix	UniParc:UPI0004EDDA5E	MapMan:21.2.3.2.2	:

Description

BnaC08g36230D

Coordinates

chrLK031826:+:1768990..1770867

Molecular Weight (calculated)

49688.0 Da

IEP (calculated)

7.057

GRAVY (calculated)

-0.421

Length

432 amino acids

Sequence
(BLAST)

001: MSPPGNGPMV PILGFLTCVA FLYLSFGDLW LDYNREAELG FVSRNGTQFV LDGKPLYVNG WNSYWFMDHA VNDHSRHRVG AMLEAGSKMG LTVCRTWAFN
101: DGGYNALQIS PGRFDERVFK ALDHVIAEAK THGVRLLLSL VNNLQNYGGK TQYVNWAWQE GVGLSSSNDS FFFDPSIRRY FKNYLTVLLT RKNSITGIEY
201: RNDPTIFAWE LINEPRCLTD ISGDTLQDWI NEMTAFIKSI DKKHLLTVGL EGFYGPKSPK RLTVNPERWA SELGSDFVRN SESPNIDFAS VHIYPDHWFH
301: DQGFEENLRF AVKWMQSHME DGDKELKKPV LFTEFGLSNM NKDYEPSQRD RFYRTIFDVV YKSAKRKRSG AGTLVWQFLI QGMEGFNDEF GIVPWEKDSI
401: QRLMMEQSCR LGRVTGRLLQ DKKATEICSN KP

Best Arabidopsis Sequence Match ( AT2G20680.1 )
(BLAST)

001: MAAPTGNGPV IPILGFLTCV AFIYLSFGDL WFGLKTEGEL AFVKRNGTQF VVDGKALYVN GWNSYWFMDH AVNDHSRHRV SAMLEAGAKM GLTVCRTWAF
101: NDGGYNALQI SPGRFDERVF KALDHVIAEA KTHGVRLLLS LVNNLQAYGG KTQYVNWAWQ EGVGLSSSND SFFFDPSIRR YFKNYLTVLL TRKNSLTGIE
201: YRNDPTIFAW ELINEPRCMS DVSGDTLQDW INEMTAFIKS IDNKHLLTVG LEGFYGPSSP KKLTVNPERW ASELGSDFVR NSDSPNIDFA SVHIYPDHWF
301: HDQGFEEKLK FVVKWMLSHI EDGDKELKKP VLFTEFGLSN LNKDYDPSQR DRFYRTIFDV IYKSAKRKRS GAGTLVWQFL IEGMEGFNDD FGIVPWEQDS
401: IQRLMIEQSC RLSRITGRHL LDKKSIEMCS HRP

Arabidopsis Description

MAN2Mannan endo-1,4-beta-mannosidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q7Y223]
SUBAcon: [plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.