Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 6
- plasma membrane 4
- golgi 5
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026266.1-P | Field mustard | vacuole | 100.0 | 100.0 |
| CDY18983 | Canola | vacuole | 99.3 | 99.3 |
| AT4G28320.1 | Thale cress | vacuole | 87.01 | 87.01 |
| CDY05783 | Canola | extracellular, plasma membrane, vacuole | 81.21 | 81.21 |
| CDY31945 | Canola | vacuole | 79.12 | 80.61 |
| CDX81978 | Canola | golgi, vacuole | 80.51 | 80.32 |
| CDY13860 | Canola | golgi, vacuole | 80.28 | 80.09 |
| VIT_12s0028g03610.t01 | Wine grape | endoplasmic reticulum, golgi, vacuole | 68.21 | 68.06 |
| KRH22381 | Soybean | vacuole | 65.66 | 66.12 |
| KRH26952 | Soybean | extracellular, plasma membrane, vacuole | 65.2 | 65.65 |
| KRH55954 | Soybean | mitochondrion, vacuole | 65.66 | 64.91 |
| Solyc07g053920.2.1 | Tomato | vacuole | 66.13 | 64.63 |
| PGSC0003DMT400047236 | Potato | vacuole | 66.13 | 64.63 |
| KRH25580 | Soybean | mitochondrion | 65.2 | 64.45 |
| PGSC0003DMT400034196 | Potato | golgi, mitochondrion, plastid, vacuole | 65.2 | 63.29 |
| GSMUA_Achr5P09360_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 57.31 | 63.01 |
| Solyc10g008300.2.1 | Tomato | golgi, mitochondrion, vacuole | 64.73 | 62.84 |
| GSMUA_Achr1P04970_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 62.41 | 61.7 |
| GSMUA_Achr8P20030_001 | Banana | golgi, plastid, vacuole | 58.24 | 56.03 |
| TraesCS3D01G273400.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 57.54 | 55.73 |
| TraesCS3B01G307900.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 57.31 | 55.63 |
| TraesCS3A01G274200.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 57.31 | 55.63 |
| Zm00001d043443_P001 | Maize | plasma membrane | 57.77 | 54.97 |
| Os01t0746700-00 | Rice | endoplasmic reticulum, plasma membrane, vacuole | 56.38 | 54.61 |
| EES03598 | Sorghum | endoplasmic reticulum, vacuole | 57.54 | 53.8 |
| GSMUA_Achr10P... | Banana | nucleus, plasma membrane, plastid, vacuole | 59.63 | 53.32 |
| HORVU3Hr1G071210.3 | Barley | extracellular, plasma membrane, vacuole | 56.84 | 52.35 |
| CDX73899 | Canola | extracellular | 28.31 | 42.81 |
| CDY11173 | Canola | endoplasmic reticulum, vacuole | 41.3 | 40.27 |
| CDY36280 | Canola | endoplasmic reticulum, extracellular, vacuole | 38.75 | 40.24 |
| CDY15229 | Canola | golgi, vacuole | 37.35 | 39.46 |
| CDX89985 | Canola | golgi, vacuole | 37.35 | 39.17 |
| CDY45231 | Canola | extracellular, vacuole | 38.52 | 35.39 |
| CDY61603 | Canola | nucleus | 35.96 | 21.99 |
| CDY68324 | Canola | endoplasmic reticulum, vacuole | 38.52 | 20.17 |
Protein Annotations
| EnsemblPlants:CDX89187 | EnsemblPlantsGene:GSBRNA2T00149354001 | Gene3D:3.20.20.80 | GO:A0A078DJW2 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004553 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | InterPro:Glyco_hydro_5 |
| InterPro:Glycoside_hydrolase_SF | PANTHER:PTHR31451 | PANTHER:PTHR31451:SF1 | PFAM:PF00150 | ProteinID:CDX89187 | ProteinID:CDX89187.1 |
| SEG:seg | SUPFAM:SSF51445 | TMHMM:TMhelix | UniParc:UPI0002544125 | MapMan:21.2.3.2.2 | : |
Description
BnaA01g17060D
Coordinates
chrLK031858:+:20366..22324
Molecular Weight (calculated)
49995.5 Da
IEP (calculated)
7.655
GRAVY (calculated)
-0.417
Length
431 amino acids
Sequence
(BLAST)
(BLAST)
001: MVPARNGSAI PVLGFLICAA FIYLSFRDLW LNHKWRTEIG FVKRNGTQFV VDGKALYVNG WNSYWFMDHA VNEHSRYLVS EMLETGAKMG LTVCRTWAFN
101: DGGYNALQIS PGRFDERVFK ALDHVIAEAK KHDVRLLLCL VNNLQAYGGK SQYVQWAWQE GVGLSSSNDS FFFDPSIRKY FKNYLTALLT RKNSVTGIEY
201: RNDPTIFAWE LINEPRCTSD VSGDTLQDWI DEMTSFIKSI DDKHLLTVGL EGFYGPNSPK RLTVNPEMWP SELGTDFVRN SNSSNIDFAS VHIYPDHWFH
301: NQTFEDKLKF VVQWMQSHIE DGMKELKKPV LFTEFGLSNL NKDYEPSQRE RFYRTIFDVV YKSAKRRKAG AGTLVWQLFM EGMEGFNDEF GIVPHEQDPM
401: YRLMVEQSCR LGKVTGRREE HKLRKLCSHK H
101: DGGYNALQIS PGRFDERVFK ALDHVIAEAK KHDVRLLLCL VNNLQAYGGK SQYVQWAWQE GVGLSSSNDS FFFDPSIRKY FKNYLTALLT RKNSVTGIEY
201: RNDPTIFAWE LINEPRCTSD VSGDTLQDWI DEMTSFIKSI DDKHLLTVGL EGFYGPNSPK RLTVNPEMWP SELGTDFVRN SNSSNIDFAS VHIYPDHWFH
301: NQTFEDKLKF VVQWMQSHIE DGMKELKKPV LFTEFGLSNL NKDYEPSQRE RFYRTIFDVV YKSAKRRKAG AGTLVWQLFM EGMEGFNDEF GIVPHEQDPM
401: YRLMVEQSCR LGKVTGRREE HKLRKLCSHK H
001: MVPTRNRPML RILGFFICAA FIYLSFRDLW LNHKGKAKLG FVKRNGTQFV VDDKPLYVNG WNSYWFMDHA VDEHSRNLVG EMLEAGAKMG LTVCRTWAFN
101: DGGYNALQIS PGRFDERVFQ ALDHVIAEAR KHDVRLLLSL VNNLQAYGGK TQYVKWAWQE GVGLSSSNDS FFFDPSIRNY FKNYLKVLLT RKNSVTGIEY
201: RNDPTIFAWE LINEPRCTTD VSGKTLQDWI DEMTGFIKSI DDKHLLTVGL EGFYGPNSPK GLTVNPEQWA SQLGTDFVQN SNSSNIDFAS VHIYPDHWFH
301: NQTFEEKLKF VVKWMQSHIE DGLKELKKPV LFTEFGLSNQ NKDYEPSQRD KFYRIIFDVV YKSAKRKKSG AGTLVWQLFM EGMETFNDDF GIVPHEQDSI
401: YKLMIEQSCR LGKVTGRLKE QKLKELCSHR H
101: DGGYNALQIS PGRFDERVFQ ALDHVIAEAR KHDVRLLLSL VNNLQAYGGK TQYVKWAWQE GVGLSSSNDS FFFDPSIRNY FKNYLKVLLT RKNSVTGIEY
201: RNDPTIFAWE LINEPRCTTD VSGKTLQDWI DEMTGFIKSI DDKHLLTVGL EGFYGPNSPK GLTVNPEQWA SQLGTDFVQN SNSSNIDFAS VHIYPDHWFH
301: NQTFEEKLKF VVKWMQSHIE DGLKELKKPV LFTEFGLSNQ NKDYEPSQRD KFYRIIFDVV YKSAKRKKSG AGTLVWQLFM EGMETFNDDF GIVPHEQDSI
401: YKLMIEQSCR LGKVTGRLKE QKLKELCSHR H
Arabidopsis Description
MAN5Mannan endo-1,4-beta-mannosidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0H6]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.