CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 6
plasma membrane 5
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45231	Canola	extracellular, vacuole	53.95	94.67
AT5G66460.1	Thale cress	vacuole	46.05	87.94
VIT_04s0023g02130.t01	Wine grape	vacuole	36.45	69.28
KRH28716	Soybean	vacuole	34.87	67.53
PGSC0003DMT400009055	Potato	extracellular, golgi, vacuole	35.12	66.74
Solyc02g084990.2.1	Tomato	nucleus	35.12	66.59
KRH76746	Soybean	plasma membrane	35.12	61.49
CDX73899	Canola	extracellular	21.14	61.05
GSMUA_Achr4P07870_001	Banana	mitochondrion	27.95	59.74
GSMUA_Achr6P27200_001	Banana	golgi, vacuole	29.53	59.56
CDY36280	Canola	endoplasmic reticulum, extracellular, vacuole	29.77	59.04
GSMUA_Achr4P02940_001	Banana	golgi, vacuole	30.5	58.92
TraesCS3D01G241300.1	Wheat	extracellular	30.26	58.59
TraesCS3A01G241000.1	Wheat	golgi, vacuole	30.13	58.35
TraesCS3B01G269200.1	Wheat	extracellular	29.89	57.88
Os01t0663300-01	Rice	endoplasmic reticulum, golgi, vacuole	28.31	57.82
Zm00001d043965_P001	Maize	extracellular, vacuole	29.77	57.51
OQU79706	Sorghum	vacuole	21.63	57.05
EES01213	Sorghum	golgi, vacuole	29.89	56.94
GSMUA_Achr9P06930_001	Banana	extracellular	29.16	56.07
HORVU3Hr1G060060.8	Barley	golgi, vacuole	30.13	55.61
CDX89985	Canola	golgi, vacuole	23.57	47.2
CDY15229	Canola	golgi, vacuole	23.33	47.06
CDY11173	Canola	endoplasmic reticulum, vacuole	22.84	42.53
CDY31945	Canola	vacuole	21.26	41.37
CDX81978	Canola	golgi, vacuole	21.39	40.74
CDY13860	Canola	golgi, vacuole	21.39	40.74
CDY05783	Canola	extracellular, plasma membrane, vacuole	21.26	40.6
CDX89187	Canola	vacuole	20.17	38.52
CDY18983	Canola	vacuole	20.17	38.52
CDY61603	Canola	nucleus	20.41	23.83

Protein Annotations

Gene3D:1.25.40.10	MapMan:21.2.3.2.2	Gene3D:3.20.20.80	GO:A0A078JNJ0	UniProt:A0A078JNJ0	EnsemblPlants:CDY68324
ProteinID:CDY68324	ProteinID:CDY68324.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005488
GO:GO:0005515	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00073461001
InterPro:Glyco_hydro_5	InterPro:Glycoside_hydrolase_SF	InterPro:IPR002885	InterPro:IPR011990	PFAM:PF00150	PFAM:PF01535
PFAM:PF12854	PFAM:PF13041	PFscan:PS51375	PANTHER:PTHR31451	PANTHER:PTHR31451:SF18	InterPro:Pentatricopeptide_repeat
SUPFAM:SSF51445	SignalP:SignalP-noTM	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI0004EF3668	SEG:seg

Description

BnaCnng58510DBnaCnng58510D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JNJ0]

Coordinates

chrLK037176:+:495..4917

Molecular Weight (calculated)

92878.7 Da

IEP (calculated)

8.855

GRAVY (calculated)

-0.323

Length

823 amino acids

Sequence
(BLAST)

001: MKPLCLVTIL SILIQQSYLK LGADAFSRDG FVRTKGVQFS LNGYPYYANG FNAYWLMYVA SDPSQRPKIS AAFQEASRHG LTVARTWAFS DGGYRPLQYS
101: PGSYNEDMFQ GLDFAIAEAR RHGIKIILSF ANNYVSFGGK KQYVDWARSR GRPVSSEDDF FTDFLVKDFY KNHIKAVLNR FNTFTKVHYR DDPTIMAWEL
201: MNEPRCPSDP TGRTIQAWIT EMAAHVKSLD RNHLLEAGLE GFYGQSSPQS KTLNPPGQFG TDFIANNRIP GIDFVTVHSY PDEWFVDSNE QSQMEFLNKW
301: LDAHIQDAQN VLHKPIILAE FGKSTKKAGS AQRDAVFNTV YGKIYESAKR GGSAAGGLFW QLLGNGMDNF QDGYGIILSQ SSSTVNVIAQ QSRKLTLIRR
401: IFARMINVEK WKRARGYGPI ETMWRAPPSS RQQGSHIRRV REPHRMITLV RNGGRFRHFC TASVEKRASL VSNQLNDQLK TLVGSGKLRD ARQVFDKMPH
501: RDVYSWTTII QGYIAATNYD EALLLFSAMH RDVVSWTSLI TAYSRIGQEE NAVKTFLEMR NSDVPPNEQT FASAFAACAS LSRLVWGEQL HDNVISLGLG
601: DYLSVSNSMM NMYSTCGELN SASVLFRGMR CRDIISWSTI IGGYAEHGKS KEAIDLFEKS LKVGFRPDDV SFISVLTACS HSGLLGLGFH YFNLMQDKYN
701: MSPAKEHYGC MVDLLCRAGR LSEAEKMIDE MPCEKDDVVW TTLLRACTAK RDVERGRRAA ERVLEPGWSS ILIKDRVSAF ASGGRSHPQT EDIYSVLELL
801: VSGAEPLRYG CEMKRDSWSI QIL

Best Arabidopsis Sequence Match ( AT5G66460.1 )
(BLAST)

001: MKLLALFPFL AIVIQLSCWE LGTDALPSGG FVRTKGVQFS LNGYPYYANG FNAYWLMYVA SDPSQRSKIS TAFQDASRHG LTVARTWAFS DGGYRALQYS
101: PGSYNEDMFQ GLDFALAEAR RHGIKIILSF ANNYESFGGR KQYVDWARSR GRPVSSEDDF FTDSLVKDFY KNHIKAVLNR FNTFTKVHYK DDPTIMAWEL
201: MNEPRCPSDP SGRAIQAWIT EMAAHVKSLD RNHLLEAGLE GFYGQSSPQS KTLNPPGQFG TDFIANNRIP GIDFVTVHSY PDEWFPDSSE QSQMDFLNKW
301: LDAHIQDAQN VLHKPIILAE FGKSMKKPGY TPAQRDIVFN TVYSKIYGSA KRGGAAAGGL FWQLLVNGID NFQDGYGIIL SQSSSTVNVI SQQSRKLTLI
401: RKIFARMINV EKWKRARGQG QVGKRGHKIN N

Arabidopsis Description

MAN7MAN7 [Source:UniProtKB/TrEMBL;Acc:A0A178UNQ8]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.