Factsheet for Solyc02g084990.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 6
peroxisome 1
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol, peroxisome, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400009055	Potato	extracellular, golgi, vacuole	97.23	97.46
VIT_04s0023g02130.t01	Wine grape	vacuole	76.5	76.67
KRH28716	Soybean	vacuole	74.65	76.24
KRH76746	Soybean	plasma membrane	74.19	68.51
AT5G66460.1	Thale cress	vacuole	65.44	65.89
GSMUA_Achr4P07870_001	Banana	mitochondrion	57.83	65.19
GSMUA_Achr4P02940_001	Banana	golgi, vacuole	63.82	65.02
GSMUA_Achr6P27200_001	Banana	golgi, vacuole	58.76	62.5
Solyc04g080620.2.1	Tomato	endoplasmic reticulum, vacuole	59.45	62.47
CDY45231	Canola	extracellular, vacuole	67.05	62.05
GSMUA_Achr9P06930_001	Banana	extracellular	59.45	60.28
TraesCS3D01G241300.1	Wheat	extracellular	58.76	60.0
TraesCS3B01G269200.1	Wheat	extracellular	58.29	59.53
TraesCS3A01G241000.1	Wheat	golgi, vacuole	58.06	59.29
Os01t0663300-01	Rice	endoplasmic reticulum, golgi, vacuole	54.84	59.06
Zm00001d043965_P001	Maize	extracellular, vacuole	56.91	57.98
CDX73899	Canola	extracellular	37.33	56.84
EES01213	Sorghum	golgi, vacuole	56.45	56.71
OQU79706	Sorghum	vacuole	40.55	56.41
HORVU3Hr1G060060.8	Barley	golgi, vacuole	57.37	55.83
Solyc01g008720.1.1	Tomato	extracellular, golgi, vacuole	49.08	53.12
Solyc01g008710.2.1	Tomato	extracellular	48.62	52.88
CDY36280	Canola	endoplasmic reticulum, extracellular, vacuole	50.23	52.53
Bra034151.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	50.23	52.53
Solyc06g064520.2.1	Tomato	vacuole	50.0	52.42
Bra001383.1-P	Field mustard	extracellular	49.54	51.81
AT3G10890.1	Thale cress	extracellular	48.62	50.97
AT3G10900.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	47.23	50.25
Solyc12g013770.1.1	Tomato	vacuole	36.18	49.68
Solyc12g013670.1.1	Tomato	cytosol	19.12	46.89
AT3G30540.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	35.48	46.81
Solyc12g013750.1.1	Tomato	cytosol	10.6	44.23
Solyc10g074920.1.1	Tomato	extracellular	44.93	43.43
Solyc10g008300.2.1	Tomato	golgi, mitochondrion, vacuole	41.94	40.99
Solyc07g053920.2.1	Tomato	vacuole	41.01	40.36
Solyc11g012190.1.1	Tomato	golgi, vacuole	40.55	38.51
Solyc12g013760.1.1	Tomato	cytosol	5.99	37.68
CDY68324	Canola	endoplasmic reticulum, vacuole	66.59	35.12

Protein Annotations

MapMan:21.2.3.2.2	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0016798
GO:GO:0016985	GO:GO:0046355	InterPro:Glyco_hydro_5	InterPro:Glycoside_hydrolase_SF	UniProt:K4BB13	PFAM:PF00150
PANTHER:PTHR31451	PANTHER:PTHR31451:SF18	SUPFAM:SSF51445	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc02g084990.2	EnsemblPlants:Solyc02g084990.2.1
TMHMM:TMhelix	UniParc:UPI0002768E4C	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2:-:48018833..48022336

Molecular Weight (calculated)

49877.9 Da

IEP (calculated)

9.871

GRAVY (calculated)

-0.488

Length

434 amino acids

Sequence
(BLAST)

001: MKKHFAYAFL LIFLLQHVCL FVQVEAGDGF IRTRGIHFML NGDPFYANGF NAYWLMYIAA DPSQRSKVTD AFREASSHGL TVARTWAFSD GGYRPLQYAP
101: GSYNEDMFKG LDFVISEARR YGIKVILSFA NNYESFGGKK QYVNWARSHG QYLNSDDDFF KNSVVKGYYK NHIMTVLNRY NRFSGVVYKN DPTIMAWELM
201: NEPRCTSDHS GRTIQAWATE MASYVKSIDR NHLLEVGLEG FYGQTTPQRR NLNPNFDIGT DFIANNRIPG IDFATVHAYP DQWVTNSNDQ GQLSFLNNWL
301: DSHIQDAQYI LRKPLLITEF GKSSKDSGFS SYQRDLLYNT VYYKIYSSAK RGGAAAGGLF WQLLSEGMNS FGDGYEIILS QNPSTANLIA QQSHKLYQIR
401: KIFARMRNIQ RWKRAKAARR SDWTNRNKGK RIGN

Best Arabidopsis Sequence Match ( AT5G66460.1 )
(BLAST)

001: MKLLALFPFL AIVIQLSCWE LGTDALPSGG FVRTKGVQFS LNGYPYYANG FNAYWLMYVA SDPSQRSKIS TAFQDASRHG LTVARTWAFS DGGYRALQYS
101: PGSYNEDMFQ GLDFALAEAR RHGIKIILSF ANNYESFGGR KQYVDWARSR GRPVSSEDDF FTDSLVKDFY KNHIKAVLNR FNTFTKVHYK DDPTIMAWEL
201: MNEPRCPSDP SGRAIQAWIT EMAAHVKSLD RNHLLEAGLE GFYGQSSPQS KTLNPPGQFG TDFIANNRIP GIDFVTVHSY PDEWFPDSSE QSQMDFLNKW
301: LDAHIQDAQN VLHKPIILAE FGKSMKKPGY TPAQRDIVFN TVYSKIYGSA KRGGAAAGGL FWQLLVNGID NFQDGYGIIL SQSSSTVNVI SQQSRKLTLI
401: RKIFARMINV EKWKRARGQG QVGKRGHKIN N

Arabidopsis Description

MAN7MAN7 [Source:UniProtKB/TrEMBL;Acc:A0A178UNQ8]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.