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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:
  • extracellular 4
  • golgi 4
  • plasma membrane 4
  • endoplasmic reticulum 5
  • vacuole 5
  • mitochondrion 1
  • plastid 1
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400009479 Potato cytosol, nucleus, peroxisome 88.86 96.83
KRH61141 Soybean cytosol, nucleus, vacuole 65.13 66.42
KRH51830 Soybean endoplasmic reticulum, vacuole 65.62 64.52
VIT_18s0001g12830.t01 Wine grape extracellular, vacuole 66.1 63.05
KRH05852 Soybean extracellular, golgi, vacuole 63.2 60.42
KRH15168 Soybean extracellular, golgi, vacuole 62.23 59.91
Solyc02g084990.2.1 Tomato nucleus 62.47 59.45
GSMUA_Achr6P27200_001 Banana golgi, vacuole 58.6 59.31
GSMUA_Achr4P02940_001 Banana golgi, vacuole 60.29 58.45
GSMUA_Achr4P07870_001 Banana mitochondrion 54.48 58.44
GSMUA_Achr9P06930_001 Banana extracellular 59.08 57.01
Solyc01g008710.2.1 Tomato extracellular 53.27 55.14
OQU79706 Sorghum vacuole 41.4 54.81
Solyc01g008720.1.1 Tomato extracellular, golgi, vacuole 51.82 53.37
Os01t0663300-01 Rice endoplasmic reticulum, golgi, vacuole 52.06 53.35
Zm00001d043965_P001 Maize extracellular, vacuole 54.72 53.05
EES01213 Sorghum golgi, vacuole 55.45 53.01
TraesCS3D01G241300.1 Wheat extracellular 54.24 52.71
TraesCS3A01G241000.1 Wheat golgi, vacuole 54.0 52.47
TraesCS3B01G269200.1 Wheat extracellular 54.0 52.47
Solyc12g013770.1.1 Tomato vacuole 39.47 51.58
Solyc06g064520.2.1 Tomato vacuole 50.36 50.24
HORVU3Hr1G060060.8 Barley golgi, vacuole 54.24 50.22
Solyc12g013670.1.1 Tomato cytosol 18.64 43.5
Solyc12g013750.1.1 Tomato cytosol 10.9 43.27
Solyc10g074920.1.1 Tomato extracellular 46.73 42.98
Solyc10g008300.2.1 Tomato golgi, mitochondrion, vacuole 42.86 39.86
Solyc07g053920.2.1 Tomato vacuole 42.37 39.68
Solyc11g012190.1.1 Tomato golgi, vacuole 41.16 37.2
Solyc12g013760.1.1 Tomato cytosol 5.08 30.43
Protein Annotations
MapMan:21.2.3.2.2Gene3D:3.20.20.80GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005975
GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016787GO:GO:0016798
GO:GO:0016985GO:GO:0046355InterPro:Glyco_hydro_5InterPro:Glycoside_hydrolase_SFUniProt:K4BVE1PFAM:PF00150
PANTHER:PTHR31451PANTHER:PTHR31451:SF18SUPFAM:SSF51445SignalP:SignalP-noTMEnsemblPlantsGene:Solyc04g080620.2EnsemblPlants:Solyc04g080620.2.1
UniParc:UPI0002765A7BSEG:seg::::
Description
No Description!
Coordinates
chr4:+:64733643..64737733
Molecular Weight (calculated)
46684.1 Da
IEP (calculated)
7.382
GRAVY (calculated)
-0.333
Length
413 amino acids
Sequence
(BLAST)
001: MKLYVFFLYF IYFFHNVKAN VINDDFIKTK GVHFMLNDSP FYANGFNAYW LMLIGSDPSQ RHKVSSVFQD AANHGLTVGR TWAFSDAGYS PLQFSPGFYN
101: EIMFQGLDYA IHEAGKNGIK LILSLVNNYN DFGGKNQYVN WAKSQGQSLT SDDDFYTNSV VKGYFKNHIK AVVTRINSIS GIAYKDDPTI MAWELMNEPR
201: CSSDLSGSTV QKWISEMASY TKSIDSNHLV EAGLEGFYGN SDTQKNPNFQ VGTDFIANNQ IPEIDFATVH SYPDQWLTGQ DDEAQLNFLT NWLKVHIEDS
301: QTILKKPIIF AEFGKTTKGP GFTPQQRDVI FNTVYSSIFS SAKGGGAAAG GLFWHVLAEG MDSFKDGYEI ILSESSSVSD IIIQQSKRLN KIRKMYARLK
401: NIEKWKKARK LKD
Best Arabidopsis Sequence Match ( AT5G66460.1 )
(BLAST)
001: MKLLALFPFL AIVIQLSCWE LGTDALPSGG FVRTKGVQFS LNGYPYYANG FNAYWLMYVA SDPSQRSKIS TAFQDASRHG LTVARTWAFS DGGYRALQYS
101: PGSYNEDMFQ GLDFALAEAR RHGIKIILSF ANNYESFGGR KQYVDWARSR GRPVSSEDDF FTDSLVKDFY KNHIKAVLNR FNTFTKVHYK DDPTIMAWEL
201: MNEPRCPSDP SGRAIQAWIT EMAAHVKSLD RNHLLEAGLE GFYGQSSPQS KTLNPPGQFG TDFIANNRIP GIDFVTVHSY PDEWFPDSSE QSQMDFLNKW
301: LDAHIQDAQN VLHKPIILAE FGKSMKKPGY TPAQRDIVFN TVYSKIYGSA KRGGAAAGGL FWQLLVNGID NFQDGYGIIL SQSSSTVNVI SQQSRKLTLI
401: RKIFARMINV EKWKRARGQG QVGKRGHKIN N
Arabidopsis Description
MAN7MAN7 [Source:UniProtKB/TrEMBL;Acc:A0A178UNQ8]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.