Factsheet for Solyc12g013670.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g013760.1.1	Tomato	cytosol	37.29	95.65
Solyc12g013750.1.1	Tomato	cytosol	51.98	88.46
PGSC0003DMT400092800	Potato	peroxisome	50.85	44.34
Solyc06g064520.2.1	Tomato	vacuole	73.45	31.4
KRH39855	Soybean	vacuole	61.58	26.78
KRH23949	Soybean	vacuole	60.45	26.29
VIT_18s0089g00200.t01	Wine grape	vacuole	58.76	25.12
GSMUA_Achr6P12730_001	Banana	golgi, vacuole	50.85	21.9
GSMUA_Achr9P08250_001	Banana	vacuole	54.8	21.56
Solyc12g013770.1.1	Tomato	vacuole	37.29	20.89
Solyc01g008720.1.1	Tomato	extracellular, golgi, vacuole	46.89	20.7
Solyc02g084990.2.1	Tomato	nucleus	46.89	19.12
Solyc01g008710.2.1	Tomato	extracellular	42.94	19.05
Solyc04g080620.2.1	Tomato	endoplasmic reticulum, vacuole	43.5	18.64
Solyc10g074920.1.1	Tomato	extracellular	41.24	16.26
Solyc10g008300.2.1	Tomato	golgi, mitochondrion, vacuole	39.55	15.77
Solyc07g053920.2.1	Tomato	vacuole	37.85	15.19
Solyc11g012190.1.1	Tomato	golgi, vacuole	38.98	15.1
GSMUA_Achr6P12740_001	Banana	extracellular, vacuole	20.9	14.74
GSMUA_Achr6P28970_001	Banana	extracellular, golgi	2.26	1.82

Protein Annotations

EnsemblPlants:Solyc12g013670.1.1	EnsemblPlantsGene:Solyc12g013670.1	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0016985
GO:GO:0046355	InterPro:Glycoside_hydrolase_SF	PANTHER:PTHR31451	PANTHER:PTHR31451:SF15	SUPFAM:SSF51445	UniParc:UPI000276A4AD
UniProt:K4DCQ2	MapMan:21.2.3.2.2	:	:	:	:

Description

No Description!

Coordinates

chr12:+:4508121..4508751

Molecular Weight (calculated)

19983.8 Da

IEP (calculated)

6.630

GRAVY (calculated)

-0.277

Length

177 amino acids

Sequence
(BLAST)

001: MARFVKSLYN KHLLEVGMEG FYGDSIPKRK LVNPGYQVGT DFISNHFINE IDFATIHAYT DQCDEAQLVW MEKWIRSHWE DARNILKKPL VLAEFGKSSR
101: SGEGSRDIFM SSVYRNVYNL AKEGGTMGGS LVWQLMAHGM ENYDDGYSIV LGLNPSTTQI ISNQAHIMTA LAHSLNS

Best Arabidopsis Sequence Match ( AT5G66460.1 )
(BLAST)

001: MKLLALFPFL AIVIQLSCWE LGTDALPSGG FVRTKGVQFS LNGYPYYANG FNAYWLMYVA SDPSQRSKIS TAFQDASRHG LTVARTWAFS DGGYRALQYS
101: PGSYNEDMFQ GLDFALAEAR RHGIKIILSF ANNYESFGGR KQYVDWARSR GRPVSSEDDF FTDSLVKDFY KNHIKAVLNR FNTFTKVHYK DDPTIMAWEL
201: MNEPRCPSDP SGRAIQAWIT EMAAHVKSLD RNHLLEAGLE GFYGQSSPQS KTLNPPGQFG TDFIANNRIP GIDFVTVHSY PDEWFPDSSE QSQMDFLNKW
301: LDAHIQDAQN VLHKPIILAE FGKSMKKPGY TPAQRDIVFN TVYSKIYGSA KRGGAAAGGL FWQLLVNGID NFQDGYGIIL SQSSSTVNVI SQQSRKLTLI
401: RKIFARMINV EKWKRARGQG QVGKRGHKIN N

Arabidopsis Description

MAN7MAN7 [Source:UniProtKB/TrEMBL;Acc:A0A178UNQ8]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.