Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 1
- mitochondrion 3
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g013670.1.1 | Tomato | cytosol | 95.65 | 37.29 |
| Solyc12g013750.1.1 | Tomato | cytosol | 53.62 | 35.58 |
| Solyc06g064520.2.1 | Tomato | vacuole | 65.22 | 10.87 |
| KRH23949 | Soybean | vacuole | 50.72 | 8.6 |
| KRH39855 | Soybean | vacuole | 50.72 | 8.6 |
| VIT_18s0089g00200.t01 | Wine grape | vacuole | 47.83 | 7.97 |
| GSMUA_Achr6P12730_001 | Banana | golgi, vacuole | 42.03 | 7.06 |
| Solyc01g008720.1.1 | Tomato | extracellular, golgi, vacuole | 40.58 | 6.98 |
| GSMUA_Achr9P08250_001 | Banana | vacuole | 43.48 | 6.67 |
| Solyc01g008710.2.1 | Tomato | extracellular | 34.78 | 6.02 |
| Solyc02g084990.2.1 | Tomato | nucleus | 37.68 | 5.99 |
| Solyc10g074920.1.1 | Tomato | extracellular | 34.78 | 5.35 |
| Solyc04g080620.2.1 | Tomato | endoplasmic reticulum, vacuole | 30.43 | 5.08 |
| Solyc11g012190.1.1 | Tomato | golgi, vacuole | 30.43 | 4.6 |
| Solyc10g008300.2.1 | Tomato | golgi, mitochondrion, vacuole | 27.54 | 4.28 |
| Solyc07g053920.2.1 | Tomato | vacuole | 26.09 | 4.08 |
| PGSC0003DMT400092800 | Potato | peroxisome | 0.0 | 0.0 |
| GSMUA_Achr6P28970_001 | Banana | extracellular, golgi | 0.0 | 0.0 |
| Solyc12g013770.1.1 | Tomato | vacuole | 0.0 | 0.0 |
| GSMUA_Achr6P12740_001 | Banana | extracellular, vacuole | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Solyc12g013760.1.1 | EnsemblPlantsGene:Solyc12g013760.1 | Gene3D:3.20.20.80 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005975 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0016985 |
| GO:GO:0046355 | PANTHER:PTHR31451 | PANTHER:PTHR31451:SF15 | UniParc:UPI000276A4B6 | UniProt:K4DCR1 | MapMan:35.1 |
Description
No Description!
Coordinates
chr12:-:4581978..4582187
Molecular Weight (calculated)
7612.0 Da
IEP (calculated)
5.378
GRAVY (calculated)
-0.178
Length
69 amino acids
Sequence
(BLAST)
(BLAST)
1: MSSVYRNVYN LAKEGGTMEG SLVWQLMAHG MENYDDGYSI VLGLNPSTTQ IISNQAHIMT ALAHSLNHE
001: MKLLALFPFL AIVIQLSCWE LGTDALPSGG FVRTKGVQFS LNGYPYYANG FNAYWLMYVA SDPSQRSKIS TAFQDASRHG LTVARTWAFS DGGYRALQYS
101: PGSYNEDMFQ GLDFALAEAR RHGIKIILSF ANNYESFGGR KQYVDWARSR GRPVSSEDDF FTDSLVKDFY KNHIKAVLNR FNTFTKVHYK DDPTIMAWEL
201: MNEPRCPSDP SGRAIQAWIT EMAAHVKSLD RNHLLEAGLE GFYGQSSPQS KTLNPPGQFG TDFIANNRIP GIDFVTVHSY PDEWFPDSSE QSQMDFLNKW
301: LDAHIQDAQN VLHKPIILAE FGKSMKKPGY TPAQRDIVFN TVYSKIYGSA KRGGAAAGGL FWQLLVNGID NFQDGYGIIL SQSSSTVNVI SQQSRKLTLI
401: RKIFARMINV EKWKRARGQG QVGKRGHKIN N
101: PGSYNEDMFQ GLDFALAEAR RHGIKIILSF ANNYESFGGR KQYVDWARSR GRPVSSEDDF FTDSLVKDFY KNHIKAVLNR FNTFTKVHYK DDPTIMAWEL
201: MNEPRCPSDP SGRAIQAWIT EMAAHVKSLD RNHLLEAGLE GFYGQSSPQS KTLNPPGQFG TDFIANNRIP GIDFVTVHSY PDEWFPDSSE QSQMDFLNKW
301: LDAHIQDAQN VLHKPIILAE FGKSMKKPGY TPAQRDIVFN TVYSKIYGSA KRGGAAAGGL FWQLLVNGID NFQDGYGIIL SQSSSTVNVI SQQSRKLTLI
401: RKIFARMINV EKWKRARGQG QVGKRGHKIN N
Arabidopsis Description
MAN7MAN7 [Source:UniProtKB/TrEMBL;Acc:A0A178UNQ8]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.