Factsheet for Solyc07g053920.2.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 1
mitochondrion 1
vacuole 5
cytosol 1
extracellular 3
endoplasmic reticulum 3
plasma membrane 3
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	vacuole
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400047236	Potato	vacuole	97.96	97.96
Solyc10g008300.2.1	Tomato	golgi, mitochondrion, vacuole	82.54	81.98
Bra036494.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	47.85	73.01
VIT_12s0028g03610.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	70.29	71.76
Bra031137.1-P	Field mustard	golgi, vacuole	68.71	70.14
CDY13860	Canola	golgi, vacuole	68.71	70.14
CDY05783	Canola	extracellular, plasma membrane, vacuole	68.25	69.84
AT2G20680.1	Thale cress	plasma membrane, vacuole	68.48	69.75
CDX81978	Canola	golgi, vacuole	68.25	69.68
Bra036493.1-P	Field mustard	vacuole	66.44	69.27
CDY31945	Canola	vacuole	66.44	69.27
KRH22381	Soybean	vacuole	66.21	68.22
KRH26952	Soybean	extracellular, plasma membrane, vacuole	65.99	67.99
AT4G28320.1	Thale cress	vacuole	66.44	67.98
Bra026266.1-P	Field mustard	vacuole	64.63	66.13
CDY18983	Canola	vacuole	64.63	66.13
CDX89187	Canola	vacuole	64.63	66.13
KRH25580	Soybean	mitochondrion	65.31	66.06
KRH55954	Soybean	mitochondrion, vacuole	65.08	65.83
GSMUA_Achr5P09360_001	Banana	endoplasmic reticulum, extracellular, vacuole	55.78	62.76
GSMUA_Achr1P04970_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	61.22	61.93
TraesCS3A01G274200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	57.6	57.21
TraesCS3B01G307900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	57.37	56.98
Os01t0746700-00	Rice	endoplasmic reticulum, plasma membrane, vacuole	57.37	56.85
Zm00001d043443_P001	Maize	plasma membrane	58.28	56.73
TraesCS3D01G273400.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	57.14	56.63
GSMUA_Achr8P20030_001	Banana	golgi, plastid, vacuole	56.92	56.03
EES03598	Sorghum	endoplasmic reticulum, vacuole	58.5	55.97
HORVU3Hr1G071210.3	Barley	extracellular, plasma membrane, vacuole	58.05	54.7
GSMUA_Achr10P...	Banana	nucleus, plasma membrane, plastid, vacuole	58.28	53.32
Solyc11g012190.1.1	Tomato	golgi, vacuole	47.17	45.51
Solyc01g008720.1.1	Tomato	extracellular, golgi, vacuole	39.0	42.89
Solyc01g008710.2.1	Tomato	extracellular	38.78	42.86
Solyc04g080620.2.1	Tomato	endoplasmic reticulum, vacuole	39.68	42.37
Solyc12g013770.1.1	Tomato	vacuole	29.71	41.46
Solyc02g084990.2.1	Tomato	nucleus	40.36	41.01
Solyc10g074920.1.1	Tomato	extracellular	41.72	40.98
Solyc06g064520.2.1	Tomato	vacuole	38.1	40.58
Solyc12g013670.1.1	Tomato	cytosol	15.19	37.85
Solyc12g013750.1.1	Tomato	cytosol	8.16	34.62
Solyc12g013760.1.1	Tomato	cytosol	4.08	26.09

Protein Annotations

MapMan:21.2.3.2.2	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016798	GO:GO:0016985	GO:GO:0046355	InterPro:Glyco_hydro_5
InterPro:Glycoside_hydrolase_SF	UniProt:K4CFT7	PFAM:PF00150	PANTHER:PTHR31451	PANTHER:PTHR31451:SF1	SUPFAM:SSF51445
EnsemblPlantsGene:Solyc07g053920.2	EnsemblPlants:Solyc07g053920.2.1	TMHMM:TMhelix	UniParc:UPI000276C202	:	:

Description

No Description!

Coordinates

chr7:-:62333650..62337528

Molecular Weight (calculated)

50999.6 Da

IEP (calculated)

7.976

GRAVY (calculated)

-0.346

Length

441 amino acids

Sequence
(BLAST)

001: MVKSSMNRML AGNGLFYPII GFASFIAFLY LSFGDLWVNY SKEINLSFVE RNGTQFFVDG KVFYINGWNS YWLMDHAADY NTRPRIRTML QAGAKMGLTV
101: CRTWAFNDAG YNALQISPGK FDEKVFRALD HVIAEARRNG IRLILSLVNN LQAYGGKTQY VKWAWEEGVA LSASNDSFFY DPSIRRYFKS YVKTVLTRRN
201: IYTGIEYRDD PTIFAWELIN EPRCMTDPSG DTLQDWIEEM STFVKSIDRK HLLTVGLEGF YGPKSPKKTT ANPEIWAADL GSDFVRNSIL STVDFASVHV
301: YPDHWFHHKN FEEMLKFAAK WMLSHIEDGD KELKKPVLFT EFGLSNDNDD FEPAQRDRFL KMVLDVIYKS AKRNKSGAGS FFWQFLVEKM ERFNDEYGVV
401: PWESPSTYRL ITEQSCRLAK VQGLHSTQIE NVNNFCASRK N

Best Arabidopsis Sequence Match ( AT2G20680.1 )
(BLAST)

001: MAAPTGNGPV IPILGFLTCV AFIYLSFGDL WFGLKTEGEL AFVKRNGTQF VVDGKALYVN GWNSYWFMDH AVNDHSRHRV SAMLEAGAKM GLTVCRTWAF
101: NDGGYNALQI SPGRFDERVF KALDHVIAEA KTHGVRLLLS LVNNLQAYGG KTQYVNWAWQ EGVGLSSSND SFFFDPSIRR YFKNYLTVLL TRKNSLTGIE
201: YRNDPTIFAW ELINEPRCMS DVSGDTLQDW INEMTAFIKS IDNKHLLTVG LEGFYGPSSP KKLTVNPERW ASELGSDFVR NSDSPNIDFA SVHIYPDHWF
301: HDQGFEEKLK FVVKWMLSHI EDGDKELKKP VLFTEFGLSN LNKDYDPSQR DRFYRTIFDV IYKSAKRKRS GAGTLVWQFL IEGMEGFNDD FGIVPWEQDS
401: IQRLMIEQSC RLSRITGRHL LDKKSIEMCS HRP

Arabidopsis Description

MAN2Mannan endo-1,4-beta-mannosidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q7Y223]
SUBAcon: [plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.