Factsheet for GSMUA_Achr8P20030_001

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plastid, vacuole

Predictor Summary:

nucleus 1
vacuole 1
cytosol 1
mitochondrion 1
plastid 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P09360_001	Banana	endoplasmic reticulum, extracellular, vacuole	59.38	67.86
GSMUA_Achr1P04970_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	65.18	66.97
GSMUA_Achr10P...	Banana	nucleus, plasma membrane, plastid, vacuole	71.43	66.39
Bra036494.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	42.41	65.74
VIT_12s0028g03610.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	60.27	62.5
AT2G20680.1	Thale cress	plasma membrane, vacuole	59.38	61.43
Bra036493.1-P	Field mustard	vacuole	57.37	60.76
CDY31945	Canola	vacuole	57.37	60.76
CDY05783	Canola	extracellular, plasma membrane, vacuole	57.81	60.09
CDY13860	Canola	golgi, vacuole	57.59	59.72
Bra031137.1-P	Field mustard	golgi, vacuole	57.59	59.72
CDX81978	Canola	golgi, vacuole	57.14	59.26
Zm00001d043443_P001	Maize	plasma membrane	59.15	58.5
KRH55954	Soybean	mitochondrion, vacuole	56.92	58.49
KRH22381	Soybean	vacuole	55.8	58.41
KRH25580	Soybean	mitochondrion	56.7	58.26
AT4G28320.1	Thale cress	vacuole	56.03	58.24
Bra026266.1-P	Field mustard	vacuole	56.03	58.24
CDX89187	Canola	vacuole	56.03	58.24
CDY18983	Canola	vacuole	56.03	58.24
KRH26952	Soybean	extracellular, plasma membrane, vacuole	55.58	58.18
PGSC0003DMT400034196	Potato	golgi, mitochondrion, plastid, vacuole	57.37	57.88
Solyc10g008300.2.1	Tomato	golgi, mitochondrion, vacuole	57.14	57.66
PGSC0003DMT400047236	Potato	vacuole	56.25	57.14
EES03598	Sorghum	endoplasmic reticulum, vacuole	58.71	57.05
Solyc07g053920.2.1	Tomato	vacuole	56.03	56.92
TraesCS3A01G274200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	55.36	55.86
TraesCS3B01G307900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	55.13	55.63
TraesCS3D01G273400.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	54.91	55.28
Os01t0746700-00	Rice	endoplasmic reticulum, plasma membrane, vacuole	54.46	54.83
HORVU3Hr1G071210.3	Barley	extracellular, plasma membrane, vacuole	55.58	53.21
GSMUA_Achr5P22340_001	Banana	cytosol	43.75	49.75
GSMUA_Achr8P24410_001	Banana	mitochondrion	37.5	47.86
GSMUA_Achr6P12740_001	Banana	extracellular, vacuole	24.33	43.43
GSMUA_Achr6P27200_001	Banana	golgi, vacuole	39.29	43.14
GSMUA_Achr7P22010_001	Banana	cytosol	39.73	43.0
GSMUA_Achr4P02940_001	Banana	golgi, vacuole	40.85	42.96
GSMUA_Achr6P30560_001	Banana	vacuole	39.73	42.79
GSMUA_Achr4P07870_001	Banana	mitochondrion	36.61	42.6
GSMUA_Achr9P06930_001	Banana	extracellular	39.06	40.89
GSMUA_Achr6P28970_001	Banana	extracellular, golgi	19.2	39.09
GSMUA_Achr6P12730_001	Banana	golgi, vacuole	35.49	38.69
GSMUA_Achr3P12210_001	Banana	cytosol	41.07	38.66
GSMUA_Achr9P08250_001	Banana	vacuole	37.5	37.33
GSMUA_Achr3P09750_001	Banana	endoplasmic reticulum	38.39	37.07

Protein Annotations

MapMan:21.2.3.2.2	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016798	EnsemblPlantsGene:GSMUA_Achr8G20030_001	EnsemblPlants:GSMUA_Achr8P20030_001	EnsemblPlants:GSMUA_Achr8T20030_001	InterPro:Glyco_hydro_5	InterPro:Glycoside_hydrolase_SF
UniProt:M0TS06	PFAM:PF00150	PANTHER:PTHR31451	PANTHER:PTHR31451:SF1	SUPFAM:SSF51445	TMHMM:TMhelix
UniParc:UPI00029489E1	SEG:seg	:	:	:	:

Description

Mannan endo-1,4-beta-mannosidase 2 [Source:GMGC_GENE;Acc:GSMUA_Achr8G20030_001]

Coordinates

chr8:+:25139707..25141822

Molecular Weight (calculated)

50923.3 Da

IEP (calculated)

7.309

GRAVY (calculated)

-0.449

Length

448 amino acids

Sequence
(BLAST)

001: MNFVWGRKGS WSKPPPGSSK RTKPRNGKLC PALGFVCCMV FMYMAFGAVK LRTQEPRSSF VKRNGTHFMV DGRVFYVNGW NSYWLMDQAA EASSRSRVTE
101: IFQTGARMGL TVCRTWAFND GADHALQVSL GIFDERVFEA LDWVIVEAQK HGIRLLLSLV NNLQLYGGKT QYVKWAREEG FGSSSTNDSF FFDPSIRSYF
201: KIYLKTILTR KNHLTGTEYR DDPTIFAWEL MNEPQCTSDA SGDTLQEWIE EMAEYVKRID KKHLLTVGLE GFYGAPSPPE KTKVNPGKSY GELGSDFLRN
301: SKTPDIDFAS AHINPDNWLM DANLTEKTDY VSKWVTSHIE DGEKELNKPV LFTEFGLSDK NKNFDHSHRA TFYKSIYDTI YESALRNGAG AGTFIWHFLV
401: GGMEKYTDDF GIIPGETPSI DRLIKEQSCR LITLQHGKDL PERSSTVC

Best Arabidopsis Sequence Match ( AT2G20680.1 )
(BLAST)

001: MAAPTGNGPV IPILGFLTCV AFIYLSFGDL WFGLKTEGEL AFVKRNGTQF VVDGKALYVN GWNSYWFMDH AVNDHSRHRV SAMLEAGAKM GLTVCRTWAF
101: NDGGYNALQI SPGRFDERVF KALDHVIAEA KTHGVRLLLS LVNNLQAYGG KTQYVNWAWQ EGVGLSSSND SFFFDPSIRR YFKNYLTVLL TRKNSLTGIE
201: YRNDPTIFAW ELINEPRCMS DVSGDTLQDW INEMTAFIKS IDNKHLLTVG LEGFYGPSSP KKLTVNPERW ASELGSDFVR NSDSPNIDFA SVHIYPDHWF
301: HDQGFEEKLK FVVKWMLSHI EDGDKELKKP VLFTEFGLSN LNKDYDPSQR DRFYRTIFDV IYKSAKRKRS GAGTLVWQFL IEGMEGFNDD FGIVPWEQDS
401: IQRLMIEQSC RLSRITGRHL LDKKSIEMCS HRP

Arabidopsis Description

MAN2Mannan endo-1,4-beta-mannosidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q7Y223]
SUBAcon: [plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.