Factsheet for GSMUA_Achr6P12730_001

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 6
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P12740_001	Banana	extracellular, vacuole	53.77	88.05
PGSC0003DMT400039828	Potato	cytosol	9.49	61.9
PGSC0003DMT400092800	Potato	peroxisome	29.44	59.61
KRH23949	Soybean	vacuole	57.91	58.48
KRH39855	Soybean	vacuole	57.66	58.23
VIT_18s0089g00190.t01	Wine grape	extracellular, vacuole	56.93	58.21
VIT_18s0089g00180.t01	Wine grape	vacuole	47.93	58.11
VIT_18s0089g00170.t01	Wine grape	vacuole	56.69	57.82
VIT_18s0089g00160.t01	Wine grape	vacuole	56.2	57.32
PGSC0003DMT400039735	Potato	cytosol	43.55	57.19
GSMUA_Achr9P08250_001	Banana	vacuole	61.07	55.78
Solyc12g013770.1.1	Tomato	vacuole	42.58	55.38
Solyc06g064520.2.1	Tomato	vacuole	55.72	55.31
PGSC0003DMT400039596	Potato	vacuole	44.77	55.09
PGSC0003DMT400093759	Potato	cytosol	16.06	53.66
PGSC0003DMT400092618	Potato	extracellular	16.55	52.71
VIT_18s0089g00140.t01	Wine grape	cytosol, peroxisome, plastid, vacuole	53.28	52.27
GSMUA_Achr6P27200_001	Banana	golgi, vacuole	51.09	51.47
Solyc12g013670.1.1	Tomato	cytosol	21.9	50.85
PGSC0003DMT400083217	Potato	cytosol	22.87	50.81
GSMUA_Achr9P06930_001	Banana	extracellular	51.58	49.53
GSMUA_Achr4P07870_001	Banana	mitochondrion	45.5	48.57
GSMUA_Achr4P02940_001	Banana	golgi, vacuole	50.12	48.36
GSMUA_Achr6P30560_001	Banana	vacuole	48.91	48.32
GSMUA_Achr6P28970_001	Banana	extracellular, golgi	25.3	47.27
Solyc12g013750.1.1	Tomato	cytosol	11.92	47.12
GSMUA_Achr7P22010_001	Banana	cytosol	45.5	45.17
PGSC0003DMT400039582	Potato	vacuole	23.84	44.95
GSMUA_Achr3P12210_001	Banana	cytosol	48.91	42.23
Solyc12g013760.1.1	Tomato	cytosol	7.06	42.03
GSMUA_Achr5P22340_001	Banana	cytosol	39.17	40.86
GSMUA_Achr5P09360_001	Banana	endoplasmic reticulum, extracellular, vacuole	37.96	39.8
GSMUA_Achr1P04970_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	42.09	39.68
GSMUA_Achr8P24410_001	Banana	mitochondrion	33.82	39.6
GSMUA_Achr3P09750_001	Banana	endoplasmic reticulum	43.07	38.15
GSMUA_Achr8P20030_001	Banana	golgi, plastid, vacuole	38.69	35.49
GSMUA_Achr10P...	Banana	nucleus, plasma membrane, plastid, vacuole	39.17	33.4

Protein Annotations

EnsemblPlants:GSMUA_Achr6P12730_001	EnsemblPlants:GSMUA_Achr6T12730_001	EnsemblPlantsGene:GSMUA_Achr6G12730_001	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798
InterPro:Glyco_hydro_5	InterPro:Glycoside_hydrolase_SF	PANTHER:PTHR31451	PANTHER:PTHR31451:SF15	PFAM:PF00150	SEG:seg
SignalP:SignalP-noTM	SUPFAM:SSF51445	UniParc:UPI0002952D05	UniProt:M0T6H1	MapMan:21.2.3.2.2	:

Description

Mannan endo-1,4-beta-mannosidase 5 [Source:GMGC_GENE;Acc:GSMUA_Achr6G12730_001]

Coordinates

chr6:-:8491552..8493121

Molecular Weight (calculated)

45730.6 Da

IEP (calculated)

6.111

GRAVY (calculated)

-0.318

Length

411 amino acids

Sequence
(BLAST)

001: MASFVVGLRR FLGALALLLL AHQAAAAEPP AFVGRSGSKL VVNGSPFLFN GFNAYWLMNV ASEDQAKVSK TLSDAAAAGL TVCRTWAFND GGNPSLQSSP
101: GVYNEKMFQG LDFVVSEAKN HSIRLILSLV NNFKDYGGRS QYVQWARDAG ESIQTDDDFY TNAKVKQYYK NHVQKVLTRV NTITKVAYKD DPTILSWELM
201: NEPRCEVDYS GQTVTAWVKE MAAYTKSIDS KHLLQVGFEG FYGNSTPDKI KLYNPNGYQL GTDFITSNQV NEIDYTTIHA YPDIWLQGQS EEARKTFLQQ
301: WFSSHWNDSV KVLGKPLVFA EFGKSKTAPG YSQKVRDDFF SYVYDVIYSD AETSGGSFSG GLVWQVMGDG MESYYDGYEV VLSQDSTTTA VIKKQSDAMA
401: ALEKRLSGSH H

Best Arabidopsis Sequence Match ( AT3G10890.1 )
(BLAST)

001: MKCLCFVVLL AILIAQNSSD LGVKSASSDG FVSRKGVQFI LNGKPFYANG FNAYWLAYEA TDSTTRFKIT YVFQNATIHD LTIVRTWGFR DGGYRALQIA
101: PGVYDEKTFQ GLDFAIAEAK RLGIKMIITF VNNYSDFGGR KQYVDWAKNT GQNVSSDDDF YTNPLVKQYY KNHVKTMVNR VNTFTKVEYK DEPTIMGWEL
201: MNEPQCRADP SGKTLTAWMN EMALYVKSVD SKHLLSTGLE GFYGDSSPQR KTSLNPVAAN VLGTDFIANH KLDAIDFASI HSYPDLWFPN LDEKSRLNLL
301: RKWLECHLED AQNILKKPLI LGEFGKPTNT PGYTQAQRDA VFNATFDTIY ESAEKGGPAA GALFWHVISD GMNNFKDPLS IVLSENSTTV NIITEESRKL
401: GLIRGKGKLS KTKI

Arabidopsis Description

MAN3Mannan endo-1,4-beta-mannosidase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SG94]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.