Factsheet for VIT_18s0089g00140.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, vacuole, cytosol

Predictor Summary:

plastid 2
vacuole 2
cytosol 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid, vacuole
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	vacuole
Plant-mPloc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0089g00180.t01	Wine grape	vacuole	72.31	89.38
VIT_18s0089g00160.t01	Wine grape	vacuole	85.68	89.08
VIT_18s0089g00170.t01	Wine grape	vacuole	81.62	84.86
VIT_18s0089g00190.t01	Wine grape	extracellular, vacuole	74.7	77.86
KRH23949	Soybean	vacuole	64.2	66.09
KRH39855	Soybean	vacuole	64.2	66.09
VIT_18s0089g00200.t01	Wine grape	vacuole	61.58	62.32
GSMUA_Achr9P08250_001	Banana	vacuole	60.38	56.22
GSMUA_Achr6P12730_001	Banana	golgi, vacuole	52.27	53.28
GSMUA_Achr6P12740_001	Banana	extracellular, vacuole	31.74	52.99
GSMUA_Achr6P28970_001	Banana	extracellular, golgi	26.73	50.91
VIT_18s0001g12830.t01	Wine grape	extracellular, vacuole	49.88	48.27
VIT_04s0023g02130.t01	Wine grape	vacuole	48.69	47.11
VIT_08s0058g01460.t01	Wine grape	cytosol, nucleus, plastid, vacuole	43.44	44.61
VIT_08s0058g01480.t01	Wine grape	cytosol, mitochondrion, vacuole	44.15	41.29
VIT_12s0028g03610.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	38.66	37.5
VIT_00s0187g00320.t01	Wine grape	golgi, vacuole	39.38	36.59
VIT_00s0187g00280.t01	Wine grape	golgi, vacuole	39.14	36.53

Protein Annotations

MapMan:21.2.3.2.2	Gene3D:3.20.20.80	ProteinID:CCB44159	ProteinID:CCB44159.1	UniProt:F6GW24	EMBL:FN594956
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016798	GO:GO:0016985	GO:GO:0046355	InterPro:Glyco_hydro_5	InterPro:Glycoside_hydrolase_SF	PFAM:PF00150
PANTHER:PTHR31451	PANTHER:PTHR31451:SF34	SUPFAM:SSF51445	TMHMM:TMhelix	UniParc:UPI00021097A5	ArrayExpress:VIT_18s0089g00140
EnsemblPlantsGene:VIT_18s0089g00140	EnsemblPlants:VIT_18s0089g00140.t01	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr18:-:27892542..27903415

Molecular Weight (calculated)

46795.4 Da

IEP (calculated)

8.367

GRAVY (calculated)

-0.237

Length

419 amino acids

Sequence
(BLAST)

001: MKKDAAAYVK SKLNTSASYL DQQEFLKQNP VTTMAYFSRI ISFSVLSLLI ALACEARVLL QSSGFVQTRN TQFILNGSPF FFNGFNSYWM MNVAADPSQR
101: SKVSDVFSQA AAARLSVCRT WAFNDGGTQA LQISPGVYDE RVFQGLDFVI SEAKKNGVRL ILSLSNNYKD FGGRPQYVNW ARNAGAPVNS DDDFYANEVV
201: KGYYKNHVKR VLTRINTITR PRCQVDYSGK TLNGWIQEMA SFVKSIDSNH LLTVGMEGFY GDSMPEKKAI NPGYQVGTDF ISNHLIKEID FSTIHAYPDI
301: WLSGKDDSSQ MAFMLRWMTS HLTDSETIIN KPMVFSEFGK SSKDPGYSLS ARDSFLNAVY TNIYNFARSG GIGGGLVWQL MAEGMQSYDD GYEIVLSQNP
401: STSSVITQQS NKMAVLDRV

Best Arabidopsis Sequence Match ( AT1G02310.1 )
(BLAST)

001: MLNILPFFLF FLPFLIGNNR ICVAVKTGFV GRNGTQFVLN GEQVYLNGFN AYWMMTTAAD TASKGRATVT TALRQASAVG MNVARIWGFN EGDYIPLQIS
101: PGSYSEDVFK GLDFVVYEAG RFNIKLIISL VNNFEDYGGR KKYVEWAGLD EPDEFYTNSA VKQFYKNHVK TVLTRKNTIT GRMYKDDPTI FSWELINEPR
201: CNDSTASNIL QDWVKEMASY VKSIDSNHLL EIGLEGFYGE SIPERTVYNP GGRVLTGTDF ITNNQIPDID FATIHIYPDS WLPLQSSRTG EQDTFVDRWI
301: GAHIEDCDNI IKKPLLITEF GKSSKYPGFS LEKRNKFFQR VYDVIYDSAR AGGSCTGGVF WQLTTNRTGL LGDGYEVFMQ AGPNTTAQLI ADQSSKLKNL
401: KYPPLVTHSA E

Arabidopsis Description

MAN1Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8AQX8]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.