Factsheet for VIT_18s0089g00190.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0089g00160.t01	Wine grape	vacuole	81.84	81.64
VIT_18s0089g00180.t01	Wine grape	vacuole	67.66	80.24
VIT_18s0089g00170.t01	Wine grape	vacuole	79.35	79.16
VIT_18s0089g00140.t01	Wine grape	cytosol, peroxisome, plastid, vacuole	77.86	74.7
KRH39855	Soybean	vacuole	68.66	67.81
KRH23949	Soybean	vacuole	68.16	67.32
VIT_18s0089g00200.t01	Wine grape	vacuole	65.42	63.53
GSMUA_Achr6P12740_001	Banana	extracellular, vacuole	36.57	58.57
GSMUA_Achr9P08250_001	Banana	vacuole	64.18	57.33
GSMUA_Achr6P12730_001	Banana	golgi, vacuole	58.21	56.93
VIT_18s0001g12830.t01	Wine grape	extracellular, vacuole	54.73	50.81
VIT_04s0023g02130.t01	Wine grape	vacuole	54.48	50.58
GSMUA_Achr6P28970_001	Banana	extracellular, golgi	27.36	50.0
VIT_08s0058g01460.t01	Wine grape	cytosol, nucleus, plastid, vacuole	47.76	47.06
VIT_08s0058g01480.t01	Wine grape	cytosol, mitochondrion, vacuole	47.76	42.86
VIT_12s0028g03610.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	44.28	41.2
VIT_00s0187g00280.t01	Wine grape	golgi, vacuole	44.53	39.87
VIT_00s0187g00320.t01	Wine grape	golgi, vacuole	44.03	39.25

Protein Annotations

EntrezGene:100260218	wikigene:100260218	MapMan:21.2.3.2.2	Gene3D:3.20.20.80	ProteinID:CBI17040	ProteinID:CBI17040.3
UniProt:D7SN11	EMBL:FN594956	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0016798
GO:GO:0016985	GO:GO:0046355	InterPro:Glyco_hydro_5	InterPro:Glycoside_hydrolase_SF	EntrezGene:LOC100260218	wikigene:LOC100260218
PFAM:PF00150	PFscan:PS51257	PANTHER:PTHR31451	PANTHER:PTHR31451:SF34	SUPFAM:SSF51445	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI00015CBFA4	ArrayExpress:VIT_18s0089g00190	EnsemblPlantsGene:VIT_18s0089g00190	EnsemblPlants:VIT_18s0089g00190.t01	RefSeq:XP_002272344
RefSeq:XP_002272344.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr18:-:27926186..27927923

Molecular Weight (calculated)

45249.6 Da

IEP (calculated)

7.563

GRAVY (calculated)

-0.239

Length

402 amino acids

Sequence
(BLAST)

001: MVCFSRIGFF WGLFLLAALA CEARVLQNSG FVQTRNTQFI LNGSPFFFNG FNSYWLMHIS AEPSQRNKVS DVFRQASAAG LSVCRTWAFS DGGYQALQIS
101: PGVYDERVFQ GLDFVISEAR KNGIRLVLTL SNNYQDFGGR PQYVNWAKSA GVSVNNDDDF YINAVIKGYY KNHVKRVITR VNTITGVAYK DDPTIMAWEL
201: MNEPRCQIDY SGKTLNGWVQ EMASYVKSID NKHLLTVGME GFYGDSLPER KPVNPGYQVG TDFISNHLIR EIDFTTIHAY PDIWLNGKDD NAQMAFLQTW
301: TTSHLTDSRT IIKKPMIFAE FGKSSKDPGY SINARDSFLN AVYTNIYSSA RSGGMGGGLV WQIMAEGMES YYDGYEIVLS KNPSTSSVIT QQSRRMAALD
401: HM

Best Arabidopsis Sequence Match ( AT5G66460.1 )
(BLAST)

001: MKLLALFPFL AIVIQLSCWE LGTDALPSGG FVRTKGVQFS LNGYPYYANG FNAYWLMYVA SDPSQRSKIS TAFQDASRHG LTVARTWAFS DGGYRALQYS
101: PGSYNEDMFQ GLDFALAEAR RHGIKIILSF ANNYESFGGR KQYVDWARSR GRPVSSEDDF FTDSLVKDFY KNHIKAVLNR FNTFTKVHYK DDPTIMAWEL
201: MNEPRCPSDP SGRAIQAWIT EMAAHVKSLD RNHLLEAGLE GFYGQSSPQS KTLNPPGQFG TDFIANNRIP GIDFVTVHSY PDEWFPDSSE QSQMDFLNKW
301: LDAHIQDAQN VLHKPIILAE FGKSMKKPGY TPAQRDIVFN TVYSKIYGSA KRGGAAAGGL FWQLLVNGID NFQDGYGIIL SQSSSTVNVI SQQSRKLTLI
401: RKIFARMINV EKWKRARGQG QVGKRGHKIN N

Arabidopsis Description

MAN7MAN7 [Source:UniProtKB/TrEMBL;Acc:A0A178UNQ8]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.