Factsheet for VIT_04s0023g02130.t01

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 7
plasma membrane 5
golgi 5
peroxisome 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol, peroxisome, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g084990.2.1	Tomato	nucleus	76.67	76.5
PGSC0003DMT400009055	Potato	extracellular, golgi, vacuole	76.21	76.21
KRH28716	Soybean	vacuole	73.67	75.06
VIT_18s0001g12830.t01	Wine grape	extracellular, vacuole	74.36	74.36
AT5G66460.1	Thale cress	vacuole	67.44	67.75
KRH76746	Soybean	plasma membrane	73.21	67.45
GSMUA_Achr4P07870_001	Banana	mitochondrion	59.58	67.01
GSMUA_Achr4P02940_001	Banana	golgi, vacuole	64.67	65.73
GSMUA_Achr6P27200_001	Banana	golgi, vacuole	61.43	65.2
CDY45231	Canola	extracellular, vacuole	68.59	63.33
GSMUA_Achr9P06930_001	Banana	extracellular	61.43	62.15
Os01t0663300-01	Rice	endoplasmic reticulum, golgi, vacuole	56.81	61.04
TraesCS3D01G241300.1	Wheat	extracellular	59.82	60.94
TraesCS3A01G241000.1	Wheat	golgi, vacuole	59.82	60.94
TraesCS3B01G269200.1	Wheat	extracellular	59.58	60.71
Zm00001d043965_P001	Maize	extracellular, vacuole	57.97	58.92
EES01213	Sorghum	golgi, vacuole	58.66	58.8
OQU79706	Sorghum	vacuole	42.26	58.65
CDX73899	Canola	extracellular	37.64	57.19
HORVU3Hr1G060060.8	Barley	golgi, vacuole	58.66	56.95
VIT_18s0089g00190.t01	Wine grape	extracellular, vacuole	50.58	54.48
Bra001383.1-P	Field mustard	extracellular	51.96	54.22
VIT_18s0089g00180.t01	Wine grape	vacuole	42.03	53.69
VIT_18s0089g00160.t01	Wine grape	vacuole	49.88	53.6
AT3G10900.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	49.88	52.94
VIT_18s0089g00170.t01	Wine grape	vacuole	49.19	52.85
CDY36280	Canola	endoplasmic reticulum, extracellular, vacuole	50.58	52.77
Bra034151.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	50.58	52.77
AT3G10890.1	Thale cress	extracellular	50.12	52.42
AT3G30540.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	39.26	51.67
VIT_18s0089g00200.t01	Wine grape	vacuole	49.19	51.45
VIT_08s0058g01460.t01	Wine grape	cytosol, nucleus, plastid, vacuole	47.11	50.0
VIT_18s0089g00140.t01	Wine grape	cytosol, peroxisome, plastid, vacuole	47.11	48.69
VIT_08s0058g01480.t01	Wine grape	cytosol, mitochondrion, vacuole	47.11	45.54
VIT_12s0028g03610.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	41.11	41.2
VIT_00s0187g00280.t01	Wine grape	golgi, vacuole	41.34	39.87
VIT_00s0187g00320.t01	Wine grape	golgi, vacuole	41.34	39.69
CDY68324	Canola	endoplasmic reticulum, vacuole	69.28	36.45

Protein Annotations

EntrezGene:100259912	wikigene:100259912	MapMan:21.2.3.2.2	Gene3D:3.20.20.80	EMBL:AM473506	ProteinID:CAN70632
ProteinID:CAN70632.1	ProteinID:CBI17484	ProteinID:CBI17484.3	UniProt:D7SPA5	EMBL:FN594959	GO:GO:0003674
GO:GO:0003676	GO:GO:0003824	GO:GO:0004553	GO:GO:0005488	GO:GO:0005975	GO:GO:0006139
GO:GO:0006259	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0015074
GO:GO:0016787	GO:GO:0016798	GO:GO:0016985	GO:GO:0046355	InterPro:Glyco_hydro_5	InterPro:Glycoside_hydrolase_SF
EntrezGene:LOC100259912	wikigene:LOC100259912	PFAM:PF00150	PANTHER:PTHR31451	PANTHER:PTHR31451:SF18	SUPFAM:SSF51445
SignalP:SignalP-noTM	TIGR:TC54360	UniParc:UPI00015CACB9	ArrayExpress:VIT_04s0023g02130	EnsemblPlantsGene:VIT_04s0023g02130	EnsemblPlants:VIT_04s0023g02130.t01
unigene:Vvi.5254	RefSeq:XP_002264115	RefSeq:XP_002264115.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr4:+:18617371..18620228

Molecular Weight (calculated)

49668.9 Da

IEP (calculated)

10.201

GRAVY (calculated)

-0.460

Length

433 amino acids

Sequence
(BLAST)

001: MRHLSWVLCL LLLIQQQGFQ VQVEAGDGFI RTRGVHFVMN GSPYYANGFN AYWLMYLASD PSQRAKVSAA FREASSHGLT VARTWAFSDG GYRPLQYSPG
101: FYNQQMFKGL DFVVAEARRY GIKLILSLVN NYESFGGKKQ YVNWARSRGQ HLSSEDDFFR NPVVKGYYKS HVKTVLNRYN SFTGVIYKND PTIMAWELMN
201: EPRCTSDPSG RTIQAWIMEM ASFVKSIDRN HLLEAGLEGF YGQTTPWRTR LNPGYYIGTD FIANNRIRGI DFATVHSYPD QWLSGSNEQS QLSFLNNWLG
301: AHIQDAQNIL RKPVLLTEFG KSWKDPGFST YQRDQLFNTV YNQIYSSARR GGAAAGGLFW QLLTEGMDSF RDGYDIVLSE SPSTANVIAQ QSRKIDQIRK
401: IFARMRNMTK WKSARASRRA EWLARNRSKR IGN

Best Arabidopsis Sequence Match ( AT5G66460.1 )
(BLAST)

001: MKLLALFPFL AIVIQLSCWE LGTDALPSGG FVRTKGVQFS LNGYPYYANG FNAYWLMYVA SDPSQRSKIS TAFQDASRHG LTVARTWAFS DGGYRALQYS
101: PGSYNEDMFQ GLDFALAEAR RHGIKIILSF ANNYESFGGR KQYVDWARSR GRPVSSEDDF FTDSLVKDFY KNHIKAVLNR FNTFTKVHYK DDPTIMAWEL
201: MNEPRCPSDP SGRAIQAWIT EMAAHVKSLD RNHLLEAGLE GFYGQSSPQS KTLNPPGQFG TDFIANNRIP GIDFVTVHSY PDEWFPDSSE QSQMDFLNKW
301: LDAHIQDAQN VLHKPIILAE FGKSMKKPGY TPAQRDIVFN TVYSKIYGSA KRGGAAAGGL FWQLLVNGID NFQDGYGIIL SQSSSTVNVI SQQSRKLTLI
401: RKIFARMINV EKWKRARGQG QVGKRGHKIN N

Arabidopsis Description

MAN7MAN7 [Source:UniProtKB/TrEMBL;Acc:A0A178UNQ8]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.