Factsheet for VIT_18s0089g00180.t01

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 6
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0089g00160.t01	Wine grape	vacuole	93.22	78.41
VIT_18s0089g00170.t01	Wine grape	vacuole	87.02	73.2
VIT_18s0089g00140.t01	Wine grape	cytosol, peroxisome, plastid, vacuole	89.38	72.31
VIT_18s0089g00190.t01	Wine grape	extracellular, vacuole	80.24	67.66
GSMUA_Achr6P12740_001	Banana	extracellular, vacuole	43.07	58.17
KRH39855	Soybean	vacuole	68.73	57.25
KRH23949	Soybean	vacuole	68.14	56.76
VIT_18s0089g00200.t01	Wine grape	vacuole	68.73	56.28
GSMUA_Achr6P28970_001	Banana	extracellular, golgi	33.33	51.36
GSMUA_Achr9P08250_001	Banana	vacuole	67.55	50.89
GSMUA_Achr6P12730_001	Banana	golgi, vacuole	58.11	47.93
VIT_18s0001g12830.t01	Wine grape	extracellular, vacuole	54.57	42.73
VIT_04s0023g02130.t01	Wine grape	vacuole	53.69	42.03
VIT_08s0058g01460.t01	Wine grape	cytosol, nucleus, plastid, vacuole	48.67	40.44
VIT_08s0058g01480.t01	Wine grape	cytosol, mitochondrion, vacuole	48.97	37.05
VIT_12s0028g03610.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	45.13	35.42
VIT_00s0187g00280.t01	Wine grape	golgi, vacuole	44.54	33.63
VIT_00s0187g00320.t01	Wine grape	golgi, vacuole	44.54	33.48

Protein Annotations

MapMan:21.2.3.2.2	Gene3D:3.20.20.80	EMBL:AM433642	EMBL:AM445638	ProteinID:CAN71607	ProteinID:CAN71607.1
ProteinID:CAN71993	ProteinID:CAN71993.1	ProteinID:CBI17041	ProteinID:CBI17041.3	UniProt:D7SN12	EMBL:FN594956
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0016798	GO:GO:0016985	GO:GO:0046355
InterPro:Glyco_hydro_5	InterPro:Glycoside_hydrolase_SF	PFAM:PF00150	PFscan:PS51257	PANTHER:PTHR31451	PANTHER:PTHR31451:SF34
SUPFAM:SSF51445	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00015CBFA5	ArrayExpress:VIT_18s0089g00180	EnsemblPlantsGene:VIT_18s0089g00180
EnsemblPlants:VIT_18s0089g00180.t01	RefSeq:XP_003634618	RefSeq:XP_003634618.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr18:+:27922457..27924039

Molecular Weight (calculated)

38255.4 Da

IEP (calculated)

8.057

GRAVY (calculated)

-0.205

Length

339 amino acids

Sequence
(BLAST)

001: MAYFGRIISF SVLFLLVALA CEARVLLQSS GFVQTRNTQF TLNGSPFFFN GFNSYWMMNV AADPSQRSKV SDVFSQAAAV RLSVCRTWAF NDGGTQALQI
101: SPGVYDERVF QGLDFVISEA RKNGVRLILS LSNNYKDFGG RPQYVSWARN AGAPVNSDDD FYTNEVVKGY YKNHVKRVLT RINTITRVAY KDDPTIMAWE
201: LINEPRCQVD YSGKTLNGWI QEMASFVKSI DSNHLLTVGM EGFYGDSMPE KKAINPGYQV GTDFISNHLI REIDFSTIHA YPDIWLSGKD DSSQMAFMLR
301: WTTSHLTDSE TIIKKPMVFS EFGKSSKTRD IVQVQGIHS

Best Arabidopsis Sequence Match ( AT1G02310.1 )
(BLAST)

001: MLNILPFFLF FLPFLIGNNR ICVAVKTGFV GRNGTQFVLN GEQVYLNGFN AYWMMTTAAD TASKGRATVT TALRQASAVG MNVARIWGFN EGDYIPLQIS
101: PGSYSEDVFK GLDFVVYEAG RFNIKLIISL VNNFEDYGGR KKYVEWAGLD EPDEFYTNSA VKQFYKNHVK TVLTRKNTIT GRMYKDDPTI FSWELINEPR
201: CNDSTASNIL QDWVKEMASY VKSIDSNHLL EIGLEGFYGE SIPERTVYNP GGRVLTGTDF ITNNQIPDID FATIHIYPDS WLPLQSSRTG EQDTFVDRWI
301: GAHIEDCDNI IKKPLLITEF GKSSKYPGFS LEKRNKFFQR VYDVIYDSAR AGGSCTGGVF WQLTTNRTGL LGDGYEVFMQ AGPNTTAQLI ADQSSKLKNL
401: KYPPLVTHSA E

Arabidopsis Description

MAN1Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8AQX8]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.