Factsheet for GSMUA_Achr6P12740_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400039828	Potato	cytosol	14.74	58.73
GSMUA_Achr6P12730_001	Banana	golgi, vacuole	88.05	53.77
PGSC0003DMT400093759	Potato	cytosol	23.51	47.97
PGSC0003DMT400092800	Potato	peroxisome	36.26	44.83
Solyc12g013770.1.1	Tomato	vacuole	55.78	44.3
VIT_18s0089g00180.t01	Wine grape	vacuole	58.17	43.07
PGSC0003DMT400039596	Potato	vacuole	54.18	40.72
VIT_18s0089g00170.t01	Wine grape	vacuole	60.16	37.47
VIT_18s0089g00160.t01	Wine grape	vacuole	58.96	36.72
VIT_18s0089g00190.t01	Wine grape	extracellular, vacuole	58.57	36.57
PGSC0003DMT400039735	Potato	cytosol	45.02	36.1
KRH23949	Soybean	vacuole	57.77	35.63
KRH39855	Soybean	vacuole	57.37	35.38
Solyc06g064520.2.1	Tomato	vacuole	57.77	35.02
PGSC0003DMT400092618	Potato	extracellular	17.93	34.88
GSMUA_Achr6P27200_001	Banana	golgi, vacuole	56.18	34.56
GSMUA_Achr9P08250_001	Banana	vacuole	61.75	34.44
PGSC0003DMT400039582	Potato	vacuole	29.48	33.95
GSMUA_Achr4P07870_001	Banana	mitochondrion	51.79	33.77
GSMUA_Achr6P28970_001	Banana	extracellular, golgi	29.48	33.64
GSMUA_Achr6P30560_001	Banana	vacuole	54.18	32.69
GSMUA_Achr4P02940_001	Banana	golgi, vacuole	54.98	32.39
GSMUA_Achr7P22010_001	Banana	cytosol	52.59	31.88
VIT_18s0089g00140.t01	Wine grape	cytosol, peroxisome, plastid, vacuole	52.99	31.74
GSMUA_Achr9P06930_001	Banana	extracellular	52.99	31.07
GSMUA_Achr5P09360_001	Banana	endoplasmic reticulum, extracellular, vacuole	46.22	29.59
GSMUA_Achr3P12210_001	Banana	cytosol	54.18	28.57
GSMUA_Achr1P04970_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	47.41	27.29
GSMUA_Achr3P09750_001	Banana	endoplasmic reticulum	49.0	26.51
GSMUA_Achr5P22340_001	Banana	cytosol	41.43	26.4
GSMUA_Achr8P24410_001	Banana	mitochondrion	36.65	26.21
GSMUA_Achr8P20030_001	Banana	golgi, plastid, vacuole	43.43	24.33
GSMUA_Achr10P...	Banana	nucleus, plasma membrane, plastid, vacuole	43.03	22.41
Solyc12g013670.1.1	Tomato	cytosol	14.74	20.9
PGSC0003DMT400083217	Potato	cytosol	13.94	18.92
Solyc12g013750.1.1	Tomato	cytosol	2.39	5.77
Solyc12g013760.1.1	Tomato	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr6P12740_001	EnsemblPlants:GSMUA_Achr6T12740_001	EnsemblPlantsGene:GSMUA_Achr6G12740_001	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798
InterPro:Glyco_hydro_5	InterPro:Glycoside_hydrolase_SF	PANTHER:PTHR31451	PANTHER:PTHR31451:SF15	PFAM:PF00150	SEG:seg
SignalP:SignalP-noTM	SUPFAM:SSF51445	UniParc:UPI00029616E4	UniProt:M0T6H2	MapMan:21.2.3.2.2	:

Description

Mannan endo-1,4-beta-mannosidase 5 [Source:GMGC_GENE;Acc:GSMUA_Achr6G12740_001]

Coordinates

chr6:-:8505387..8506510

Molecular Weight (calculated)

27761.0 Da

IEP (calculated)

8.173

GRAVY (calculated)

-0.230

Length

251 amino acids

Sequence
(BLAST)

001: MSSFVVGLRR FLGALALLLL AHQAAAAEPL AFVGRSGSKL VAAGLTVCRT WAFNDGGNPA LQSSPGVYNE KMFQGLDFAV SEAKNHGIRL VMSLINNFKD
101: FGGKTQYVQW ARDAGEAIKT DDDFYTNAKV KQYYKNHVLK VLTRVNTITK VAYKDDPTIM TWDLMNEPRC PSEPSGQTVT QAWVKEMAAY TKSIDSKHLL
201: QVGFEGFYGS STPDKIGLYN PGGYKYGTDF IIGNQVNEID YTTIHAYPDA W

Best Arabidopsis Sequence Match ( AT1G02310.1 )
(BLAST)

001: MLNILPFFLF FLPFLIGNNR ICVAVKTGFV GRNGTQFVLN GEQVYLNGFN AYWMMTTAAD TASKGRATVT TALRQASAVG MNVARIWGFN EGDYIPLQIS
101: PGSYSEDVFK GLDFVVYEAG RFNIKLIISL VNNFEDYGGR KKYVEWAGLD EPDEFYTNSA VKQFYKNHVK TVLTRKNTIT GRMYKDDPTI FSWELINEPR
201: CNDSTASNIL QDWVKEMASY VKSIDSNHLL EIGLEGFYGE SIPERTVYNP GGRVLTGTDF ITNNQIPDID FATIHIYPDS WLPLQSSRTG EQDTFVDRWI
301: GAHIEDCDNI IKKPLLITEF GKSSKYPGFS LEKRNKFFQR VYDVIYDSAR AGGSCTGGVF WQLTTNRTGL LGDGYEVFMQ AGPNTTAQLI ADQSSKLKNL
401: KYPPLVTHSA E

Arabidopsis Description

MAN1Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8AQX8]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.