Factsheet for GSMUA_Achr4P02940_001

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 6
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P07870_001	Banana	mitochondrion	71.6	79.22
GSMUA_Achr9P06930_001	Banana	extracellular	73.0	72.66
GSMUA_Achr6P27200_001	Banana	golgi, vacuole	68.31	71.32
VIT_18s0001g12830.t01	Wine grape	extracellular, vacuole	66.67	65.59
VIT_04s0023g02130.t01	Wine grape	vacuole	65.73	64.67
KRH61141	Soybean	cytosol, nucleus, vacuole	61.27	64.44
Solyc02g084990.2.1	Tomato	nucleus	65.02	63.82
KRH51830	Soybean	endoplasmic reticulum, vacuole	62.91	63.81
TraesCS3B01G269200.1	Wheat	extracellular	63.15	63.29
PGSC0003DMT400009055	Potato	extracellular, golgi, vacuole	64.32	63.28
Os01t0663300-01	Rice	endoplasmic reticulum, golgi, vacuole	59.62	63.03
Zm00001d043965_P001	Maize	extracellular, vacuole	62.68	62.68
TraesCS3D01G241300.1	Wheat	extracellular	62.44	62.59
PGSC0003DMT400009479	Potato	cytosol, nucleus, peroxisome	55.63	62.53
TraesCS3A01G241000.1	Wheat	golgi, vacuole	62.21	62.35
EES01213	Sorghum	golgi, vacuole	62.91	62.04
KRH28716	Soybean	vacuole	61.03	61.18
Solyc04g080620.2.1	Tomato	endoplasmic reticulum, vacuole	58.45	60.29
OQU79706	Sorghum	vacuole	43.43	59.29
HORVU3Hr1G060060.8	Barley	golgi, vacuole	61.97	59.19
AT5G66460.1	Thale cress	vacuole	59.62	58.93
KRH15168	Soybean	extracellular, golgi, vacuole	58.92	58.51
KRH05852	Soybean	extracellular, golgi, vacuole	58.45	57.64
GSMUA_Achr6P30560_001	Banana	vacuole	55.4	56.73
KRH76746	Soybean	plasma membrane	61.5	55.74
GSMUA_Achr6P12740_001	Banana	extracellular, vacuole	32.39	54.98
CDY45231	Canola	extracellular, vacuole	58.92	53.52
CDX73899	Canola	extracellular	35.45	52.98
Bra034151.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	50.0	51.33
CDY36280	Canola	endoplasmic reticulum, extracellular, vacuole	50.0	51.33
GSMUA_Achr6P12730_001	Banana	golgi, vacuole	48.36	50.12
Bra001383.1-P	Field mustard	extracellular	48.59	49.88
AT3G10900.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	47.65	49.75
AT3G10890.1	Thale cress	extracellular	48.12	49.52
GSMUA_Achr9P08250_001	Banana	vacuole	50.7	48.0
GSMUA_Achr3P12210_001	Banana	cytosol	53.05	47.48
AT3G30540.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	36.38	47.11
GSMUA_Achr5P09360_001	Banana	endoplasmic reticulum, extracellular, vacuole	42.02	45.66
GSMUA_Achr7P22010_001	Banana	cytosol	44.13	45.41
GSMUA_Achr5P22340_001	Banana	cytosol	41.08	44.42
GSMUA_Achr1P04970_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	44.37	43.35
GSMUA_Achr8P24410_001	Banana	mitochondrion	35.45	43.02
GSMUA_Achr8P20030_001	Banana	golgi, plastid, vacuole	42.96	40.85
GSMUA_Achr3P09750_001	Banana	endoplasmic reticulum	43.66	40.09
GSMUA_Achr6P28970_001	Banana	extracellular, golgi	20.66	40.0
GSMUA_Achr10P...	Banana	nucleus, plasma membrane, plastid, vacuole	43.43	38.38
CDY68324	Canola	endoplasmic reticulum, vacuole	58.92	30.5

Protein Annotations

EnsemblPlants:GSMUA_Achr4P02940_001	EnsemblPlants:GSMUA_Achr4T02940_001	EnsemblPlantsGene:GSMUA_Achr4G02940_001	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798
InterPro:Glyco_hydro_5	InterPro:Glycoside_hydrolase_SF	PANTHER:PTHR31451	PANTHER:PTHR31451:SF18	PFAM:PF00150	SEG:seg
SignalP:SignalP-noTM	SUPFAM:SSF51445	UniParc:UPI000294C35E	UniProt:M0SKL1	MapMan:21.2.3.2.2	:

Description

Mannan endo-1,4-beta-mannosidase 1 [Source:GMGC_GENE;Acc:GSMUA_Achr4G02940_001]

Coordinates

chr4:-:2391415..2393463

Molecular Weight (calculated)

47658.2 Da

IEP (calculated)

9.577

GRAVY (calculated)

-0.349

Length

426 amino acids

Sequence
(BLAST)

001: MKGVSLLAGL FLLLLAPRYH VEAGGGFIKT RGLNFVLDGN PFFANGFNAY WLMTLASDPS QRSKVSSAFG DASSHGLYVA RTWAFSDGGS NALQYSPGSY
101: NEQTFRGLDF VISEARRYRI RLILSLANNY DTFGGKKQYV QWARNQGQYI ASDDGFFTDS VVKGYYKNHI KTMLTRVNTI TGVAYKDDPT IFAWELMNEP
201: RCQSDLSGST IQGWITEMAA YVKSIDGNHL LEAGLEGFYG SSSPHKRFNP GLEIGTDFIA NNEIPNIDFA TIHSYPDQWL SNADEQSQLA FLSNWLGVHI
301: RDARNVIRKP LLITEFGKSW KDPGFSIYQR DTLFKTVYSK IYWSARTGGS AAGGLFWQLL SQGMDSYGDG YQIVMSEGTS TAQIITQQSR QLRYLGKLYA
401: RLRNIARLNK AKAVREEQSR GNGGRN

Best Arabidopsis Sequence Match ( AT5G66460.1 )
(BLAST)

001: MKLLALFPFL AIVIQLSCWE LGTDALPSGG FVRTKGVQFS LNGYPYYANG FNAYWLMYVA SDPSQRSKIS TAFQDASRHG LTVARTWAFS DGGYRALQYS
101: PGSYNEDMFQ GLDFALAEAR RHGIKIILSF ANNYESFGGR KQYVDWARSR GRPVSSEDDF FTDSLVKDFY KNHIKAVLNR FNTFTKVHYK DDPTIMAWEL
201: MNEPRCPSDP SGRAIQAWIT EMAAHVKSLD RNHLLEAGLE GFYGQSSPQS KTLNPPGQFG TDFIANNRIP GIDFVTVHSY PDEWFPDSSE QSQMDFLNKW
301: LDAHIQDAQN VLHKPIILAE FGKSMKKPGY TPAQRDIVFN TVYSKIYGSA KRGGAAAGGL FWQLLVNGID NFQDGYGIIL SQSSSTVNVI SQQSRKLTLI
401: RKIFARMINV EKWKRARGQG QVGKRGHKIN N

Arabidopsis Description

MAN7MAN7 [Source:UniProtKB/TrEMBL;Acc:A0A178UNQ8]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.