Factsheet for PGSC0003DMT400009479

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 1
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g080620.2.1	Tomato	endoplasmic reticulum, vacuole	96.83	88.86
KRH61141	Soybean	cytosol, nucleus, vacuole	68.07	63.7
KRH51830	Soybean	endoplasmic reticulum, vacuole	67.55	60.95
PGSC0003DMT400092800	Potato	peroxisome	31.93	59.61
VIT_18s0001g12830.t01	Wine grape	extracellular, vacuole	67.55	59.12
PGSC0003DMT400039828	Potato	cytosol	9.76	58.73
PGSC0003DMT400090248	Potato	cytosol	42.22	58.61
GSMUA_Achr4P07870_001	Banana	mitochondrion	59.1	58.18
PGSC0003DMT400095096	Potato	cytosol	46.17	56.82
GSMUA_Achr6P27200_001	Banana	golgi, vacuole	60.95	56.62
KRH05852	Soybean	extracellular, golgi, vacuole	64.38	56.48
PGSC0003DMT400009055	Potato	extracellular, golgi, vacuole	64.38	56.35
KRH15168	Soybean	extracellular, golgi, vacuole	63.59	56.18
GSMUA_Achr4P02940_001	Banana	golgi, vacuole	62.53	55.63
GSMUA_Achr9P06930_001	Banana	extracellular	62.53	55.37
PGSC0003DMT400093759	Potato	cytosol	17.94	55.28
PGSC0003DMT400039735	Potato	cytosol	43.8	53.04
Os01t0663300-01	Rice	endoplasmic reticulum, golgi, vacuole	55.94	52.61
OQU79706	Sorghum	vacuole	43.27	52.56
Zm00001d043965_P001	Maize	extracellular, vacuole	58.58	52.11
EES01213	Sorghum	golgi, vacuole	59.37	52.08
TraesCS3D01G241300.1	Wheat	extracellular	58.31	52.0
TraesCS3A01G241000.1	Wheat	golgi, vacuole	58.05	51.76
TraesCS3B01G269200.1	Wheat	extracellular	58.05	51.76
PGSC0003DMT400039596	Potato	vacuole	44.06	50.0
HORVU3Hr1G060060.8	Barley	golgi, vacuole	58.31	49.55
PGSC0003DMT400083217	Potato	cytosol	22.69	46.49
PGSC0003DMT400092618	Potato	extracellular	14.78	43.41
PGSC0003DMT400034535	Potato	cytosol, nucleus, vacuole	43.8	42.03
PGSC0003DMT400080203	Potato	endoplasmic reticulum	48.81	41.2
PGSC0003DMT400039582	Potato	vacuole	23.22	40.37
PGSC0003DMT400034196	Potato	golgi, mitochondrion, plastid, vacuole	46.44	39.64
PGSC0003DMT400047236	Potato	vacuole	44.85	38.55
PGSC0003DMT400034545	Potato	cytosol	17.15	31.71

Protein Annotations

EnsemblPlants:PGSC0003DMT400009479	EnsemblPlantsGene:PGSC0003DMG400003695	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	InterPro:Glyco_hydro_5
InterPro:Glycoside_hydrolase_SF	PANTHER:PTHR31451	PANTHER:PTHR31451:SF18	PFAM:PF00150	PGSC:PGSC0003DMG400003695	SEG:seg
SUPFAM:SSF51445	UniParc:UPI0002960125	UniProt:M0ZWB5	MapMan:21.2.3.2.2	:	:

Description

Endo-1,4-beta-mannosidase protein 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400003695]

Coordinates

chr4:+:70010511..70014082

Molecular Weight (calculated)

42374.6 Da

IEP (calculated)

6.319

GRAVY (calculated)

-0.443

Length

379 amino acids

Sequence
(BLAST)

001: MLNESPFYAN GFNAYWLMLI GSDPSQRHKV SSVLQDAASH GLTVGRTWAF SDAGYSPLQF SPGVYNENMF QGLDYAIHEA GKNGIKLILS LVNNYNDFGG
101: KNQYVNWAKS QGQSLTSDDD FYTNSVVKGY FKNHIKAVVT RNNSISGIAY KDDPTIMAWE LMNEPRCSSD LSGSTVQSWI SEMASYTKSI DSNHLVEAGL
201: EGFYGNSDTQ KNPNFQVGTD FIANNQIPEI DFATAHSYPD QWLTGQDDEA QLNFLTNWLK VHIEDSQTIL KKPIIFAEFG KTTKGPGFTP QQRDLIFNTV
301: YSSIFSSAKG GGAAAGGLFW HILAEGMDSF KDGYEIILSE SSSVSDIIIE QSKRLNKIRK MYARLKNIEK WKKPRKLKD

Best Arabidopsis Sequence Match ( AT5G66460.1 )
(BLAST)

001: MKLLALFPFL AIVIQLSCWE LGTDALPSGG FVRTKGVQFS LNGYPYYANG FNAYWLMYVA SDPSQRSKIS TAFQDASRHG LTVARTWAFS DGGYRALQYS
101: PGSYNEDMFQ GLDFALAEAR RHGIKIILSF ANNYESFGGR KQYVDWARSR GRPVSSEDDF FTDSLVKDFY KNHIKAVLNR FNTFTKVHYK DDPTIMAWEL
201: MNEPRCPSDP SGRAIQAWIT EMAAHVKSLD RNHLLEAGLE GFYGQSSPQS KTLNPPGQFG TDFIANNRIP GIDFVTVHSY PDEWFPDSSE QSQMDFLNKW
301: LDAHIQDAQN VLHKPIILAE FGKSMKKPGY TPAQRDIVFN TVYSKIYGSA KRGGAAAGGL FWQLLVNGID NFQDGYGIIL SQSSSTVNVI SQQSRKLTLI
401: RKIFARMINV EKWKRARGQG QVGKRGHKIN N

Arabidopsis Description

MAN7MAN7 [Source:UniProtKB/TrEMBL;Acc:A0A178UNQ8]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.