Factsheet for TraesCS3B01G269200.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G241300.1	Wheat	extracellular	97.18	97.18
TraesCS3A01G241000.1	Wheat	golgi, vacuole	96.0	96.0
HORVU3Hr1G060060.8	Barley	golgi, vacuole	95.06	90.58
Os01t0663300-01	Rice	endoplasmic reticulum, golgi, vacuole	71.29	75.19
Zm00001d043965_P001	Maize	extracellular, vacuole	72.24	72.07
EES01213	Sorghum	golgi, vacuole	73.18	71.99
OQU79706	Sorghum	vacuole	48.94	66.67
GSMUA_Achr4P02940_001	Banana	golgi, vacuole	63.29	63.15
KRH61141	Soybean	cytosol, nucleus, vacuole	59.76	62.72
GSMUA_Achr4P07870_001	Banana	mitochondrion	56.47	62.34
KRH51830	Soybean	endoplasmic reticulum, vacuole	60.71	61.43
VIT_04s0023g02130.t01	Wine grape	vacuole	60.71	59.58
VIT_18s0001g12830.t01	Wine grape	extracellular, vacuole	60.47	59.35
Solyc02g084990.2.1	Tomato	nucleus	59.53	58.29
PGSC0003DMT400009055	Potato	extracellular, golgi, vacuole	59.29	58.2
PGSC0003DMT400009479	Potato	cytosol, nucleus, peroxisome	51.76	58.05
AT5G66460.1	Thale cress	vacuole	58.35	57.54
KRH28716	Soybean	vacuole	57.18	57.18
KRH15168	Soybean	extracellular, golgi, vacuole	57.18	56.64
CDX73899	Canola	extracellular	37.65	56.14
KRH05852	Soybean	extracellular, golgi, vacuole	56.71	55.79
Solyc04g080620.2.1	Tomato	endoplasmic reticulum, vacuole	52.47	54.0
CDY45231	Canola	extracellular, vacuole	57.88	52.45
KRH76746	Soybean	plasma membrane	57.41	51.91
TraesCS6B01G363900.1	Wheat	endoplasmic reticulum, extracellular, vacuole	50.12	51.57
Bra001383.1-P	Field mustard	extracellular	49.18	50.36
CDY36280	Canola	endoplasmic reticulum, extracellular, vacuole	48.71	49.88
Bra034151.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	48.71	49.88
TraesCS6B01G363800.1	Wheat	golgi, vacuole	46.82	49.5
AT3G10900.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	46.82	48.77
AT3G10890.1	Thale cress	extracellular	46.35	47.58
AT3G30540.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	36.71	47.42
TraesCS6B01G363700.1	Wheat	golgi, vacuole	47.29	47.07
TraesCS5B01G145200.1	Wheat	mitochondrion, plasma membrane, vacuole	42.82	43.33
TraesCS5B01G504000.1	Wheat	extracellular, golgi, vacuole	47.53	42.8
TraesCS3B01G307900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	40.94	39.19
TraesCS7B01G190600.1	Wheat	vacuole	40.0	38.9
CDY68324	Canola	endoplasmic reticulum, vacuole	57.88	29.89

Protein Annotations

EnsemblPlants:TraesCS3B01G269200.1	EnsemblPlantsGene:TraesCS3B01G269200	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_5	InterPro:Glyco_hydro_5_CS
InterPro:Glycoside_hydrolase_SF	PANTHER:PTHR31451	PANTHER:PTHR31451:SF18	PFAM:PF00150	ScanProsite:PS00659	SEG:seg
SignalP:SignalP-noTM	SUPFAM:SSF51445	MapMan:21.2.3.2.2	:	:	:

Description

No Description!

Coordinates

chr3B:+:433758320..433760461

Molecular Weight (calculated)

45715.9 Da

IEP (calculated)

9.418

GRAVY (calculated)

-0.276

Length

425 amino acids

Sequence
(BLAST)

001: MGLHHGAPVA LSLLVLLCVH GGREAEAAGG GFVRAQGTRF VINGSPYYAN GFNAYWLMTM AADPAQRGKV TSALSQAAAR GLSVARTWAF SDGGSNALQY
101: APGSYNENTF KGLDFVMSEA RKNGIKVILS LVNNYDTFGG KKQYVEWARG RGQAIGSEDG FFTNSVVKGF YKNHVKTVLT RVNTVTGVAY KNDPTILAWE
201: LMNEPRCQSD LSGRTIQSWI TEMAAHVKSI DGNHMLEAGL EGFYGPSSSR AASVNPAGHQ VGTDFIANNQ VPGIDFATVH SYPDQWLSSS DDQAQRSFLG
301: RWLDAHIADA QGTLRKPLLI AEFGKSQRDP GFSSAQRDAQ FGMVYAKIYD SARRGGPTVG GLFWQLMADG MDSYGDGYQV IFAEAPASTT GVITSESRKL
401: KMLGKAFARA ERAKRDGSGK IAGGN

Best Arabidopsis Sequence Match ( AT5G66460.1 )
(BLAST)

001: MKLLALFPFL AIVIQLSCWE LGTDALPSGG FVRTKGVQFS LNGYPYYANG FNAYWLMYVA SDPSQRSKIS TAFQDASRHG LTVARTWAFS DGGYRALQYS
101: PGSYNEDMFQ GLDFALAEAR RHGIKIILSF ANNYESFGGR KQYVDWARSR GRPVSSEDDF FTDSLVKDFY KNHIKAVLNR FNTFTKVHYK DDPTIMAWEL
201: MNEPRCPSDP SGRAIQAWIT EMAAHVKSLD RNHLLEAGLE GFYGQSSPQS KTLNPPGQFG TDFIANNRIP GIDFVTVHSY PDEWFPDSSE QSQMDFLNKW
301: LDAHIQDAQN VLHKPIILAE FGKSMKKPGY TPAQRDIVFN TVYSKIYGSA KRGGAAAGGL FWQLLVNGID NFQDGYGIIL SQSSSTVNVI SQQSRKLTLI
401: RKIFARMINV EKWKRARGQG QVGKRGHKIN N

Arabidopsis Description

MAN7MAN7 [Source:UniProtKB/TrEMBL;Acc:A0A178UNQ8]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.