CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
golgi 5
plasma membrane 5
endoplasmic reticulum 5
vacuole 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001383.1-P	Field mustard	extracellular	99.3	68.19
CDY36280	Canola	endoplasmic reticulum, extracellular, vacuole	78.6	53.98
AT3G30540.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	61.75	53.5
AT3G10900.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	73.33	51.23
OQU79706	Sorghum	vacuole	49.12	44.87
KRH28716	Soybean	vacuole	57.89	38.82
TraesCS3A01G241000.1	Wheat	golgi, vacuole	56.84	38.12
Os01t0663300-01	Rice	endoplasmic reticulum, golgi, vacuole	53.68	37.97
TraesCS3D01G241300.1	Wheat	extracellular	56.14	37.65
TraesCS3B01G269200.1	Wheat	extracellular	56.14	37.65
VIT_04s0023g02130.t01	Wine grape	vacuole	57.19	37.64
Solyc02g084990.2.1	Tomato	nucleus	56.84	37.33
GSMUA_Achr6P27200_001	Banana	golgi, vacuole	53.33	37.25
CDY45231	Canola	extracellular, vacuole	61.05	37.1
PGSC0003DMT400009055	Potato	extracellular, golgi, vacuole	56.14	36.95
EES01213	Sorghum	golgi, vacuole	55.79	36.81
HORVU3Hr1G060060.8	Barley	golgi, vacuole	56.84	36.32
Zm00001d043965_P001	Maize	extracellular, vacuole	54.04	36.15
GSMUA_Achr4P02940_001	Banana	golgi, vacuole	52.98	35.45
CDX89985	Canola	golgi, vacuole	50.88	35.28
KRH76746	Soybean	plasma membrane	57.89	35.11
CDY15229	Canola	golgi, vacuole	49.12	34.31
GSMUA_Achr9P06930_001	Banana	extracellular	51.23	34.11
GSMUA_Achr4P07870_001	Banana	mitochondrion	44.56	32.99
CDY11173	Canola	endoplasmic reticulum, vacuole	49.12	31.67
CDY13860	Canola	golgi, vacuole	43.51	28.7
CDX81978	Canola	golgi, vacuole	43.51	28.7
CDY31945	Canola	vacuole	42.46	28.61
CDY05783	Canola	extracellular, plasma membrane, vacuole	42.81	28.31
CDX89187	Canola	vacuole	42.81	28.31
CDY18983	Canola	vacuole	42.11	27.84
CDY68324	Canola	endoplasmic reticulum, vacuole	61.05	21.14
CDY61603	Canola	nucleus	42.11	17.02

Protein Annotations

MapMan:21.2.3.2.2	Gene3D:3.20.20.80	GO:A0A078CCG0	EnsemblPlants:CDX73899	ProteinID:CDX73899	ProteinID:CDX73899.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00111618001	InterPro:Glyco_hydro_5	InterPro:Glycoside_hydrolase_SF	PFAM:PF00150	PANTHER:PTHR31451
PANTHER:PTHR31451:SF18	SUPFAM:SSF51445	SignalP:SignalP-noTM	UniParc:UPI0004EE6FFC	:	:

Description

BnaA03g31480D

Coordinates

chrLK031800:+:447842..448946

Molecular Weight (calculated)

31844.5 Da

IEP (calculated)

5.338

GRAVY (calculated)

-0.241

Length

285 amino acids

Sequence
(BLAST)

001: MKCLCLIVFL AFVITQSYND LEVEAASSDG FVSRKGVQFI LNGEPFYANG FNAYWLMYEA TDPNTRYKVT HALENAAGQG LTIARTWGFR DGGYRALQTN
101: LGSYDEQTFQ GLDFSIAEAK RVGIKMIIAF VNNFPDFGGK KQYMAWAKDK GQAVTSEDDF YTNALLKQAY MNHTVLNRVN TFTKVAYKDE PTIMAWELMN
201: EPQCRADTSG KTLTAWISEM ASYVKSLDSK HLLSTGSEGF YGQSTPQRMT SLNPVAANIV GSDFIANHNI DAIDFASVHS YPDTW

Best Arabidopsis Sequence Match ( AT3G10900.1 )
(BLAST)

001: MKCLCFIVLL AIVIAQSYVG VEAAPSDGFV SRNGVQFILN GKPFYANGFN AYWLAYEATD PTTRFKITNV FQNATSLGLT IARTWGFRDG AIYRALQTAP
101: GSYDEQTFQG LDFVIAEAKR IGIKLIILLV NNWDDYGGKK QYVDWARSKG EVVSSNDDFY RNPVIKDFYK NHVKTVLNRV NTFTKVAYKD EPAIMAWQLM
201: NEPRCGVDKS GKTLMDWINE MAPFVKSVDP NHLLSTGHEG FYGDSSPERK NSLNPVSANT VGADFIANHN IDAIDFASMH CGSDLWFQRL DQNSRLAFIK
301: RWLEGHIEDA QNILKKPVIL AEFGLGSDTP RYTLANRDGV FTTTYDIIYA SAQKGGSAAG ALFWEVISEG MSNFAGPSSI ILSDKSSTVN IISEHARKMG
401: LLGETTRK

Arabidopsis Description

MAN4Putative mannan endo-1,4-beta-mannosidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SG95]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.