Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 6
- golgi 5
- extracellular 6
- vacuole 5
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G30540.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 74.51 | 92.4 |
| CDX73899 | Canola | extracellular | 51.23 | 73.33 |
| AT3G10890.1 | Thale cress | extracellular | 70.83 | 69.81 |
| Bra001383.1-P | Field mustard | extracellular | 69.36 | 68.19 |
| AT5G66460.1 | Thale cress | vacuole | 56.13 | 53.13 |
| KRH28716 | Soybean | vacuole | 52.94 | 50.82 |
| VIT_04s0023g02130.t01 | Wine grape | vacuole | 52.94 | 49.88 |
| OQU79706 | Sorghum | vacuole | 37.5 | 49.04 |
| GSMUA_Achr4P02940_001 | Banana | golgi, vacuole | 49.75 | 47.65 |
| PGSC0003DMT400009055 | Potato | extracellular, golgi, vacuole | 50.25 | 47.34 |
| GSMUA_Achr4P07870_001 | Banana | mitochondrion | 44.61 | 47.27 |
| Solyc02g084990.2.1 | Tomato | nucleus | 50.25 | 47.23 |
| TraesCS3A01G241000.1 | Wheat | golgi, vacuole | 49.02 | 47.06 |
| TraesCS3D01G241300.1 | Wheat | extracellular | 49.02 | 47.06 |
| TraesCS3B01G269200.1 | Wheat | extracellular | 48.77 | 46.82 |
| EES01213 | Sorghum | golgi, vacuole | 49.51 | 46.76 |
| GSMUA_Achr6P27200_001 | Banana | golgi, vacuole | 46.57 | 46.57 |
| Zm00001d043965_P001 | Maize | extracellular, vacuole | 48.28 | 46.24 |
| KRH76746 | Soybean | plasma membrane | 52.94 | 45.96 |
| GSMUA_Achr9P06930_001 | Banana | extracellular | 48.04 | 45.79 |
| HORVU3Hr1G060060.8 | Barley | golgi, vacuole | 49.26 | 45.07 |
| Os01t0663300-01 | Rice | endoplasmic reticulum, golgi, vacuole | 44.12 | 44.66 |
| AT1G02310.2 | Thale cress | golgi, vacuole | 42.65 | 40.37 |
| AT5G01930.1 | Thale cress | endoplasmic reticulum | 43.63 | 39.73 |
| AT4G28320.1 | Thale cress | vacuole | 40.69 | 38.52 |
| AT2G20680.1 | Thale cress | plasma membrane, vacuole | 40.2 | 37.88 |
Protein Annotations
| MapMan:21.2.3.2.2 | Gene3D:3.20.20.80 | EntrezGene:820260 | ProteinID:AAF19559.1 | ProteinID:AEE74968.1 | ArrayExpress:AT3G10900 |
| EnsemblPlantsGene:AT3G10900 | RefSeq:AT3G10900 | TAIR:AT3G10900 | RefSeq:AT3G10900-TAIR-G | EnsemblPlants:AT3G10900.1 | TAIR:AT3G10900.1 |
| Unigene:At.53261 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 |
| GO:GO:0016798 | GO:GO:0016985 | GO:GO:0046355 | InterPro:Glyco_hydro_5 | InterPro:Glycoside_hydrolase_SF | RefSeq:NP_187701.1 |
| PFAM:PF00150 | PANTHER:PTHR31451 | PANTHER:PTHR31451:SF18 | UniProt:Q9SG95 | SUPFAM:SSF51445 | SignalP:SignalP-noTM |
| UniParc:UPI00000486EA | SEG:seg | : | : | : | : |
Description
MAN4Putative mannan endo-1,4-beta-mannosidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SG95]
Coordinates
chr3:-:3410252..3412070
Molecular Weight (calculated)
45378.9 Da
IEP (calculated)
7.178
GRAVY (calculated)
-0.183
Length
408 amino acids
Sequence
(BLAST)
(BLAST)
001: MKCLCFIVLL AIVIAQSYVG VEAAPSDGFV SRNGVQFILN GKPFYANGFN AYWLAYEATD PTTRFKITNV FQNATSLGLT IARTWGFRDG AIYRALQTAP
101: GSYDEQTFQG LDFVIAEAKR IGIKLIILLV NNWDDYGGKK QYVDWARSKG EVVSSNDDFY RNPVIKDFYK NHVKTVLNRV NTFTKVAYKD EPAIMAWQLM
201: NEPRCGVDKS GKTLMDWINE MAPFVKSVDP NHLLSTGHEG FYGDSSPERK NSLNPVSANT VGADFIANHN IDAIDFASMH CGSDLWFQRL DQNSRLAFIK
301: RWLEGHIEDA QNILKKPVIL AEFGLGSDTP RYTLANRDGV FTTTYDIIYA SAQKGGSAAG ALFWEVISEG MSNFAGPSSI ILSDKSSTVN IISEHARKMG
401: LLGETTRK
101: GSYDEQTFQG LDFVIAEAKR IGIKLIILLV NNWDDYGGKK QYVDWARSKG EVVSSNDDFY RNPVIKDFYK NHVKTVLNRV NTFTKVAYKD EPAIMAWQLM
201: NEPRCGVDKS GKTLMDWINE MAPFVKSVDP NHLLSTGHEG FYGDSSPERK NSLNPVSANT VGADFIANHN IDAIDFASMH CGSDLWFQRL DQNSRLAFIK
301: RWLEGHIEDA QNILKKPVIL AEFGLGSDTP RYTLANRDGV FTTTYDIIYA SAQKGGSAAG ALFWEVISEG MSNFAGPSSI ILSDKSSTVN IISEHARKMG
401: LLGETTRK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.