Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 7
- golgi 5
- extracellular 5
- vacuole 4
- plasma membrane 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11173 | Canola | endoplasmic reticulum, vacuole | 92.19 | 93.44 |
| VIT_08s0058g01460.t01 | Wine grape | cytosol, nucleus, plastid, vacuole | 66.29 | 72.79 |
| VIT_08s0058g01480.t01 | Wine grape | cytosol, mitochondrion, vacuole | 66.52 | 66.52 |
| KRH64877 | Soybean | endoplasmic reticulum | 68.53 | 66.31 |
| Solyc10g074920.1.1 | Tomato | extracellular | 65.62 | 65.48 |
| Bra005662.1-P | Field mustard | nucleus | 92.19 | 65.14 |
| PGSC0003DMT400080203 | Potato | endoplasmic reticulum | 64.96 | 64.81 |
| HORVU4Hr1G058920.3 | Barley | cytosol | 24.11 | 64.29 |
| KRH00473 | Soybean | nucleus | 65.85 | 63.85 |
| HORVU3Hr1G057870.3 | Barley | cytosol | 22.54 | 62.35 |
| KRH09553 | Soybean | endoplasmic reticulum, plastid, vacuole | 67.63 | 61.09 |
| KRH40712 | Soybean | nucleus | 66.07 | 60.53 |
| Os11t0118200-01 | Rice | cytosol | 26.12 | 57.92 |
| GSMUA_Achr3P09750_001 | Banana | endoplasmic reticulum | 59.82 | 57.76 |
| HORVU5Hr1G083020.2 | Barley | extracellular, mitochondrion, plastid, vacuole | 16.52 | 57.36 |
| HORVU5Hr1G083060.1 | Barley | cytosol, plastid, vacuole | 19.42 | 56.49 |
| HORVU3Hr1G003960.2 | Barley | cytosol | 13.84 | 53.91 |
| GSMUA_Achr7P22010_001 | Banana | cytosol | 49.55 | 53.62 |
| Os12t0117300-00 | Rice | cytosol | 44.64 | 52.36 |
| TraesCS5D01G145900.1 | Wheat | cytosol | 45.09 | 52.33 |
| HORVU6Hr1G036770.2 | Barley | cytosol | 14.06 | 50.4 |
| CDY61603 | Canola | nucleus | 79.24 | 50.35 |
| TraesCS5A01G146400.1 | Wheat | mitochondrion, plasma membrane, plastid, vacuole | 45.76 | 48.81 |
| TraesCS5B01G145200.1 | Wheat | mitochondrion, plasma membrane, vacuole | 45.76 | 48.81 |
| HORVU5Hr1G046370.1 | Barley | mitochondrion | 45.54 | 48.57 |
| Zm00001d005052_P002 | Maize | plasma membrane | 46.43 | 48.04 |
| EES09143 | Sorghum | cytosol, plasma membrane, plastid, vacuole | 45.09 | 47.31 |
| AT5G66460.1 | Thale cress | vacuole | 42.63 | 44.32 |
| AT3G10900.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 39.73 | 43.63 |
| AT3G30540.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 31.7 | 43.16 |
| AT3G10890.1 | Thale cress | extracellular | 39.29 | 42.51 |
| AT4G28320.1 | Thale cress | vacuole | 40.4 | 42.0 |
| AT1G02310.2 | Thale cress | golgi, vacuole | 39.96 | 41.53 |
| AT2G20680.1 | Thale cress | plasma membrane, vacuole | 39.51 | 40.88 |
| HORVU6Hr1G009620.1 | Barley | cytosol | 13.84 | 39.49 |
Protein Annotations
| MapMan:21.2.3.2.2 | Gene3D:3.20.20.80 | EntrezGene:831699 | ProteinID:AED90411.1 | EMBL:AK227325 | ArrayExpress:AT5G01930 |
| EnsemblPlantsGene:AT5G01930 | RefSeq:AT5G01930 | TAIR:AT5G01930 | RefSeq:AT5G01930-TAIR-G | EnsemblPlants:AT5G01930.1 | TAIR:AT5G01930.1 |
| Unigene:At.25601 | EMBL:BT005831 | ProteinID:CAB82763.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 |
| GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005975 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009791 | GO:GO:0009845 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0016798 |
| GO:GO:0016985 | GO:GO:0046355 | InterPro:Glyco_hydro_5 | InterPro:Glycoside_hydrolase_SF | Symbol:MAN6 | RefSeq:NP_195813.1 |
| PFAM:PF00150 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000200 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025297 | PANTHER:PTHR31451 | PANTHER:PTHR31451:SF35 | UniProt:Q9LZV3 |
| SUPFAM:SSF51445 | SignalP:SignalP-noTM | UniParc:UPI0000048AAE | : | : | : |
Description
MAN6Mannan endo-1,4-beta-mannosidase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZV3]
Coordinates
chr5:-:361081..362901
Molecular Weight (calculated)
50624.9 Da
IEP (calculated)
6.320
GRAVY (calculated)
-0.263
Length
448 amino acids
Sequence
(BLAST)
(BLAST)
001: MKDQLGFRIV LCSAVFIILT QNRALADLDS ESHEVNSESV GEEQWEMVQR KGMQFTLNGQ PFYVNGFNTY WMMTLAADNS TRGKVTEVFQ QASAVGMTVG
101: RTWAFNDGQW RALQKSPSVY DEEVFKALDF VLSEARKYKI RLILSLVNNW DAYGGKAQYV KWGNASGLNL TSDDDFFTNP TLRNFYQSHV RTVLNRVNTF
201: TNITYKNDPT IFAWELMNEP RCPSDPSGDK LQSWIQEMAV FVKSLDAKHL VEIGLEGFYG PSAPARTRFN PNPYAAQVGT DFIRNNQVLG IDFASVHVYP
301: DSWISPAVSN SFLEFTSSWM QAHVEDAEMY LGMPVLFTEF GVSAHDPGFN TSFRDMMLNT VYKMTLNSTR KGGAGAGSLV WQVFPQGAEF MDDGYAVYLT
401: RAHTASKIIS LQSKRLAIFN SLCSWRCRWG CKKKNQTALD ALLSHDEL
101: RTWAFNDGQW RALQKSPSVY DEEVFKALDF VLSEARKYKI RLILSLVNNW DAYGGKAQYV KWGNASGLNL TSDDDFFTNP TLRNFYQSHV RTVLNRVNTF
201: TNITYKNDPT IFAWELMNEP RCPSDPSGDK LQSWIQEMAV FVKSLDAKHL VEIGLEGFYG PSAPARTRFN PNPYAAQVGT DFIRNNQVLG IDFASVHVYP
301: DSWISPAVSN SFLEFTSSWM QAHVEDAEMY LGMPVLFTEF GVSAHDPGFN TSFRDMMLNT VYKMTLNSTR KGGAGAGSLV WQVFPQGAEF MDDGYAVYLT
401: RAHTASKIIS LQSKRLAIFN SLCSWRCRWG CKKKNQTALD ALLSHDEL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.