CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, vacuole

Predictor Summary:

plastid 2
mitochondrion 2
vacuole 1
cytosol 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH64877	Soybean	endoplasmic reticulum	85.69	91.79
VIT_08s0058g01460.t01	Wine grape	cytosol, nucleus, plastid, vacuole	66.33	80.64
KRH00473	Soybean	nucleus	72.58	77.92
VIT_08s0058g01480.t01	Wine grape	cytosol, mitochondrion, vacuole	67.14	74.33
KRH40712	Soybean	nucleus	72.38	73.42
Solyc10g074920.1.1	Tomato	extracellular	64.92	71.71
PGSC0003DMT400080203	Potato	endoplasmic reticulum	64.72	71.49
CDY11173	Canola	endoplasmic reticulum, vacuole	60.28	67.65
AT5G01930.1	Thale cress	endoplasmic reticulum	61.09	67.63
HORVU4Hr1G058920.3	Barley	cytosol	22.78	67.26
HORVU3Hr1G057870.3	Barley	cytosol	21.57	66.05
Os11t0118200-01	Rice	cytosol	25.2	61.88
HORVU5Hr1G083060.1	Barley	cytosol, plastid, vacuole	18.55	59.74
HORVU5Hr1G083020.2	Barley	extracellular, mitochondrion, plastid, vacuole	15.32	58.91
GSMUA_Achr7P22010_001	Banana	cytosol	48.79	58.45
HORVU3Hr1G003960.2	Barley	cytosol	13.51	58.26
GSMUA_Achr3P09750_001	Banana	endoplasmic reticulum	53.63	57.33
Os12t0117300-00	Rice	cytosol	43.75	56.81
TraesCS5D01G145900.1	Wheat	cytosol	43.55	55.96
HORVU6Hr1G036770.2	Barley	cytosol	13.51	53.6
HORVU5Hr1G046370.1	Barley	mitochondrion	44.15	52.14
TraesCS5A01G146400.1	Wheat	mitochondrion, plasma membrane, plastid, vacuole	44.15	52.14
TraesCS5B01G145200.1	Wheat	mitochondrion, plasma membrane, vacuole	44.15	52.14
EES09143	Sorghum	cytosol, plasma membrane, plastid, vacuole	44.56	51.76
Zm00001d005052_P002	Maize	plasma membrane	44.56	51.04
KRG96633	Soybean	nucleus	40.12	48.54
KRH68364	Soybean	vacuole	40.12	48.54
Bra005662.1-P	Field mustard	nucleus	61.09	47.79
KRH39855	Soybean	vacuole	38.71	47.17
KRH23949	Soybean	vacuole	38.71	47.17
KRH61141	Soybean	cytosol, nucleus, vacuole	38.51	47.16
KRH28716	Soybean	vacuole	40.32	47.06
KRG96685	Soybean	golgi, vacuole	39.31	46.54
KRH51830	Soybean	endoplasmic reticulum, vacuole	38.91	45.95
KRH68408	Soybean	vacuole	37.9	45.3
KRH22381	Soybean	vacuole	38.71	44.86
KRH26952	Soybean	extracellular, plasma membrane, vacuole	38.1	44.16
KRH33420	Soybean	extracellular, golgi	29.23	42.65
KRH76746	Soybean	plasma membrane	40.32	42.55
KRH25580	Soybean	mitochondrion	37.3	42.43
KRH15168	Soybean	extracellular, golgi, vacuole	36.69	42.42
KRH05852	Soybean	extracellular, golgi, vacuole	36.9	42.36
KRH55954	Soybean	mitochondrion, vacuole	36.9	41.97
HORVU6Hr1G009620.1	Barley	cytosol	13.1	41.4
CDY61603	Canola	nucleus	52.62	37.02

Protein Annotations

EntrezGene:100789254	MapMan:21.2.3.2.2	Gene3D:3.20.20.80	EMBL:ACUP02010282	EnsemblPlantsGene:GLYMA_16G220300	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016787	GO:GO:0016798	GO:GO:0016985	GO:GO:0046355	InterPro:Glyco_hydro_5
InterPro:Glycoside_hydrolase_SF	UniProt:I1MQP2	EnsemblPlants:KRH09553	ProteinID:KRH09553	ProteinID:KRH09553.1	PFAM:PF00150
PANTHER:PTHR31451	PANTHER:PTHR31451:SF17	SUPFAM:SSF51445	UniParc:UPI00029580BE	SEG:seg	:

Description

hypothetical protein

Coordinates

chr16:-:37740791..37744473

Molecular Weight (calculated)

56236.1 Da

IEP (calculated)

5.322

GRAVY (calculated)

-0.331

Length

496 amino acids

Sequence
(BLAST)

001: MYLSILTKHH TQRVPIPTDP LFFVCNFSLN LISSAILSTS PQPGIILLQL GFRKEESYMD STHTNSEYED WESVDTADSI LSYGSELGDM EENEWQMVQT
101: KGNQFVVNDQ PFYVNGFNTY WLMVFAADES TRGKVTEVFK HASSVGMSVC RTWAFNDGQW RALQKSPSVY DEDVFKALDF VVSEARKYKI RLILSLANNW
201: EAYGGKAQYV KWGNAAGLNL TSDDEFFSHP SLRSYYKAHA KTVLNRVNTF TNITYKEDPT IFAWELMNEP RCTSDSSGDV LQDWIKEMAF YVKSIDPKHL
301: VEIGLEGFYG PSTPQKYQFN PNSYAQEVGT DFIRNHQVLG VDFASVHIYP DSWISQSIAD SHLPFIKSWM EAHIEDAEKY LGMPVVFAEF GVSAKAPGYN
401: STYRDNLINT VYKTILNSTK KGGSGAGSLV WQLFPDGTDY MDDGYSIVLS KSPSTSSIIS LQSTRLALFN SLCSKKCRWG CKKRNELEKV LIHDEL

Best Arabidopsis Sequence Match ( AT2G20680.1 )
(BLAST)

001: MAAPTGNGPV IPILGFLTCV AFIYLSFGDL WFGLKTEGEL AFVKRNGTQF VVDGKALYVN GWNSYWFMDH AVNDHSRHRV SAMLEAGAKM GLTVCRTWAF
101: NDGGYNALQI SPGRFDERVF KALDHVIAEA KTHGVRLLLS LVNNLQAYGG KTQYVNWAWQ EGVGLSSSND SFFFDPSIRR YFKNYLTVLL TRKNSLTGIE
201: YRNDPTIFAW ELINEPRCMS DVSGDTLQDW INEMTAFIKS IDNKHLLTVG LEGFYGPSSP KKLTVNPERW ASELGSDFVR NSDSPNIDFA SVHIYPDHWF
301: HDQGFEEKLK FVVKWMLSHI EDGDKELKKP VLFTEFGLSN LNKDYDPSQR DRFYRTIFDV IYKSAKRKRS GAGTLVWQFL IEGMEGFNDD FGIVPWEQDS
401: IQRLMIEQSC RLSRITGRHL LDKKSIEMCS HRP

Arabidopsis Description

MAN2Mannan endo-1,4-beta-mannosidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q7Y223]
SUBAcon: [plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.