CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 4
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH09553	Soybean	endoplasmic reticulum, plastid, vacuole	91.79	85.69
KRH00473	Soybean	nucleus	80.56	80.74
VIT_08s0058g01460.t01	Wine grape	cytosol, nucleus, plastid, vacuole	71.06	80.64
KRH40712	Soybean	nucleus	79.91	75.66
VIT_08s0058g01480.t01	Wine grape	cytosol, mitochondrion, vacuole	72.14	74.55
Solyc10g074920.1.1	Tomato	extracellular	71.71	73.94
PGSC0003DMT400080203	Potato	endoplasmic reticulum	71.27	73.5
CDY11173	Canola	endoplasmic reticulum, vacuole	65.44	68.55
AT5G01930.1	Thale cress	endoplasmic reticulum	66.31	68.53
HORVU4Hr1G058920.3	Barley	cytosol	24.84	68.45
HORVU3Hr1G057870.3	Barley	cytosol	23.54	67.28
Os11t0118200-01	Rice	cytosol	27.43	62.87
HORVU5Hr1G083060.1	Barley	cytosol, plastid, vacuole	20.3	61.04
HORVU5Hr1G083020.2	Barley	extracellular, mitochondrion, plastid, vacuole	16.85	60.47
HORVU3Hr1G003960.2	Barley	cytosol	14.9	60.0
GSMUA_Achr7P22010_001	Banana	cytosol	52.92	59.18
GSMUA_Achr3P09750_001	Banana	endoplasmic reticulum	58.96	58.84
Os12t0117300-00	Rice	cytosol	47.3	57.33
TraesCS5D01G145900.1	Wheat	cytosol	47.52	56.99
HORVU6Hr1G036770.2	Barley	cytosol	14.9	55.2
TraesCS5A01G146400.1	Wheat	mitochondrion, plasma membrane, plastid, vacuole	47.95	52.86
HORVU5Hr1G046370.1	Barley	mitochondrion	47.95	52.86
EES09143	Sorghum	cytosol, plasma membrane, plastid, vacuole	48.38	52.46
TraesCS5B01G145200.1	Wheat	mitochondrion, plasma membrane, vacuole	47.52	52.38
Zm00001d005052_P002	Maize	plasma membrane	48.38	51.73
Bra005662.1-P	Field mustard	nucleus	67.39	49.21
KRH68364	Soybean	vacuole	43.41	49.02
KRG96633	Soybean	nucleus	43.2	48.78
KRH39855	Soybean	vacuole	42.76	48.65
KRH23949	Soybean	vacuole	42.55	48.4
KRH28716	Soybean	vacuole	44.28	48.24
KRH61141	Soybean	cytosol, nucleus, vacuole	41.68	47.65
KRG96685	Soybean	golgi, vacuole	42.98	47.49
KRH51830	Soybean	endoplasmic reticulum, vacuole	42.33	46.67
KRH68408	Soybean	vacuole	41.25	46.02
KRH22381	Soybean	vacuole	42.33	45.79
KRH26952	Soybean	extracellular, plasma membrane, vacuole	41.68	45.09
KRH15168	Soybean	extracellular, golgi, vacuole	41.04	44.29
KRH05852	Soybean	extracellular, golgi, vacuole	41.25	44.21
KRH33420	Soybean	extracellular, golgi	32.18	43.82
KRH76746	Soybean	plasma membrane	44.28	43.62
HORVU6Hr1G009620.1	Barley	cytosol	14.69	43.31
KRH25580	Soybean	mitochondrion	40.6	43.12
KRH55954	Soybean	mitochondrion, vacuole	40.17	42.66
CDY61603	Canola	nucleus	57.88	38.01

Protein Annotations

EntrezGene:100801139	MapMan:21.2.3.2.2	Gene3D:3.20.20.80	EMBL:ACUP02001297	EnsemblPlantsGene:GLYMA_03G002100	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016787	GO:GO:0016798	GO:GO:0016985	GO:GO:0046355	InterPro:Glyco_hydro_5
InterPro:Glycoside_hydrolase_SF	UniProt:K7KBV9	EnsemblPlants:KRH64877	ProteinID:KRH64877	ProteinID:KRH64877.1	PFAM:PF00150
PANTHER:PTHR31451	PANTHER:PTHR31451:SF17	SUPFAM:SSF51445	SignalP:SignalP-noTM	UniParc:UPI00029663AB	SEG:seg

Description

hypothetical protein

Coordinates

chr3:+:212968..216390

Molecular Weight (calculated)

52633.1 Da

IEP (calculated)

5.981

GRAVY (calculated)

-0.303

Length

463 amino acids

Sequence
(BLAST)

001: METHKRFGLR TIITLVLFLT LTKSLSSTAF DVSEYEDWKS IDIADSILSY GSELGDMEEN EWQMVQTKGN QFVVNDQPFY VNGFNTYWLM VFAADESTRG
101: KVTEVFKHAS SVGMSVCRTW AFNDGQWRAL QKSPSVYDED VFKALDFVVS EARKYKIRLI LSLVNNWEAY GGKPQYVKWG NAAGLNLTSD DDFFSHPTLR
201: SYYKAHVKTV LNRVNTFTNI TYKEDPTIFA WELMNEPRCT SDSSGDVLQD WIKEMAFYVK SIDPKHLVEI GLEGFYGPST PQKYQFNPNS YAHEVGTDFI
301: RNHQVLGVDF ASVHIYPDSW ISQSVADSHL PFIKTWMEAH IEDAEKYLGM PVVFAEFGVS AKAPGYNSTY RDNLINTVYK TILNSTKKGG SGAGSLVWQL
401: FPDGTDYMDD GYAIVLSKSP STSSIISLQS TRLALFNSLC SKKCRWGCKK RNVLEKVLYH DEL

Best Arabidopsis Sequence Match ( AT5G01930.1 )
(BLAST)

001: MKDQLGFRIV LCSAVFIILT QNRALADLDS ESHEVNSESV GEEQWEMVQR KGMQFTLNGQ PFYVNGFNTY WMMTLAADNS TRGKVTEVFQ QASAVGMTVG
101: RTWAFNDGQW RALQKSPSVY DEEVFKALDF VLSEARKYKI RLILSLVNNW DAYGGKAQYV KWGNASGLNL TSDDDFFTNP TLRNFYQSHV RTVLNRVNTF
201: TNITYKNDPT IFAWELMNEP RCPSDPSGDK LQSWIQEMAV FVKSLDAKHL VEIGLEGFYG PSAPARTRFN PNPYAAQVGT DFIRNNQVLG IDFASVHVYP
301: DSWISPAVSN SFLEFTSSWM QAHVEDAEMY LGMPVLFTEF GVSAHDPGFN TSFRDMMLNT VYKMTLNSTR KGGAGAGSLV WQVFPQGAEF MDDGYAVYLT
401: RAHTASKIIS LQSKRLAIFN SLCSWRCRWG CKKKNQTALD ALLSHDEL

Arabidopsis Description

MAN6Mannan endo-1,4-beta-mannosidase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZV3]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.