Factsheet for HORVU6Hr1G009620.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G003960.2	Barley	cytosol	42.04	57.39
HORVU6Hr1G036770.2	Barley	cytosol	40.13	50.4
HORVU5Hr1G083020.2	Barley	extracellular, mitochondrion, plastid, vacuole	41.4	50.39
HORVU5Hr1G083060.1	Barley	cytosol, plastid, vacuole	42.68	43.51
HORVU3Hr1G057870.3	Barley	cytosol	42.04	40.74
HORVU4Hr1G058920.3	Barley	cytosol	42.68	39.88
Os11t0118200-01	Rice	cytosol	45.22	35.15
TraesCS5D01G145900.1	Wheat	cytosol	52.87	21.5
Os12t0117300-00	Rice	cytosol	51.59	21.2
HORVU5Hr1G046370.1	Barley	mitochondrion	52.87	19.76
TraesCS5B01G145200.1	Wheat	mitochondrion, plasma membrane, vacuole	52.23	19.52
TraesCS5A01G146400.1	Wheat	mitochondrion, plasma membrane, plastid, vacuole	52.23	19.52
GSMUA_Achr7P22010_001	Banana	cytosol	49.04	18.6
EES09143	Sorghum	cytosol, plasma membrane, plastid, vacuole	49.68	18.27
Zm00001d005052_P002	Maize	plasma membrane	49.68	18.01
VIT_08s0058g01460.t01	Wine grape	cytosol, nucleus, plastid, vacuole	43.31	16.67
VIT_08s0058g01480.t01	Wine grape	cytosol, mitochondrion, vacuole	44.59	15.62
CDY11173	Canola	endoplasmic reticulum, vacuole	41.4	14.71
PGSC0003DMT400080203	Potato	endoplasmic reticulum	42.04	14.7
Solyc10g074920.1.1	Tomato	extracellular	42.04	14.7
KRH64877	Soybean	endoplasmic reticulum	43.31	14.69
KRH00473	Soybean	nucleus	42.04	14.29
AT5G01930.1	Thale cress	endoplasmic reticulum	39.49	13.84
HORVU7Hr1G045910.1	Barley	vacuole	38.22	13.73
HORVU5Hr1G115310.4	Barley	golgi, vacuole	35.03	13.72
HORVU3Hr1G071210.3	Barley	extracellular, plasma membrane, vacuole	40.13	13.46
KRH40712	Soybean	nucleus	41.4	13.29
KRH09553	Soybean	endoplasmic reticulum, plastid, vacuole	41.4	13.1
HORVU0Hr1G017220.2	Barley	mitochondrion, vacuole	35.67	12.93
HORVU3Hr1G060060.8	Barley	golgi, vacuole	35.67	12.56
Bra005662.1-P	Field mustard	nucleus	41.4	10.25
CDY61603	Canola	nucleus	19.75	4.4

Protein Annotations

EnsemblPlants:HORVU6Hr1G009620.1	EnsemblPlantsGene:HORVU6Hr1G009620	Gene3D:3.20.20.80	InterPro:Glycoside_hydrolase_SF	PANTHER:PTHR31451	PANTHER:PTHR31451:SF9
SUPFAM:SSF51445	UniParc:UPI000B48239E	UniProt:A0A287T9E8	MapMan:35.1	:	:

Description

No Description!

Coordinates

chrchr6H:-:17153884..17155927

Molecular Weight (calculated)

17850.1 Da

IEP (calculated)

5.762

GRAVY (calculated)

-0.448

Length

157 amino acids

Sequence
(BLAST)

001: METTGGPKPD HGWRGSNPKE VDPPRPNSSP MHFSALDFVV SEARRYKMRL ILSLCNNWED YGGKAQYVRW GKEAGVDLTS DDDFFSDPTP KGYYKAFVEY
101: CIPVIPQFQY CAYGSVKLSC TQCTTIYWAL GRVEWLEEAA FYGNSSLKVQ NTLTMVM

Best Arabidopsis Sequence Match ( AT5G01930.1 )
(BLAST)

001: MKDQLGFRIV LCSAVFIILT QNRALADLDS ESHEVNSESV GEEQWEMVQR KGMQFTLNGQ PFYVNGFNTY WMMTLAADNS TRGKVTEVFQ QASAVGMTVG
101: RTWAFNDGQW RALQKSPSVY DEEVFKALDF VLSEARKYKI RLILSLVNNW DAYGGKAQYV KWGNASGLNL TSDDDFFTNP TLRNFYQSHV RTVLNRVNTF
201: TNITYKNDPT IFAWELMNEP RCPSDPSGDK LQSWIQEMAV FVKSLDAKHL VEIGLEGFYG PSAPARTRFN PNPYAAQVGT DFIRNNQVLG IDFASVHVYP
301: DSWISPAVSN SFLEFTSSWM QAHVEDAEMY LGMPVLFTEF GVSAHDPGFN TSFRDMMLNT VYKMTLNSTR KGGAGAGSLV WQVFPQGAEF MDDGYAVYLT
401: RAHTASKIIS LQSKRLAIFN SLCSWRCRWG CKKKNQTALD ALLSHDEL

Arabidopsis Description

MAN6Mannan endo-1,4-beta-mannosidase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZV3]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.