Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G003960.2 | Barley | cytosol | 79.2 | 86.09 |
| HORVU5Hr1G083020.2 | Barley | extracellular, mitochondrion, plastid, vacuole | 67.2 | 65.12 |
| HORVU5Hr1G083060.1 | Barley | cytosol, plastid, vacuole | 75.2 | 61.04 |
| HORVU3Hr1G057870.3 | Barley | cytosol | 64.8 | 50.0 |
| HORVU4Hr1G058920.3 | Barley | cytosol | 64.8 | 48.21 |
| HORVU6Hr1G009620.1 | Barley | cytosol | 50.4 | 40.13 |
| Os11t0118200-01 | Rice | cytosol | 62.4 | 38.61 |
| TraesCS5D01G145900.1 | Wheat | cytosol | 72.0 | 23.32 |
| Os12t0117300-00 | Rice | cytosol | 65.6 | 21.47 |
| TraesCS5A01G146400.1 | Wheat | mitochondrion, plasma membrane, plastid, vacuole | 71.2 | 21.19 |
| HORVU5Hr1G046370.1 | Barley | mitochondrion | 71.2 | 21.19 |
| TraesCS5B01G145200.1 | Wheat | mitochondrion, plasma membrane, vacuole | 70.4 | 20.95 |
| GSMUA_Achr7P22010_001 | Banana | cytosol | 63.2 | 19.08 |
| Zm00001d005052_P002 | Maize | plasma membrane | 62.4 | 18.01 |
| EES09143 | Sorghum | cytosol, plasma membrane, plastid, vacuole | 60.8 | 17.8 |
| VIT_08s0058g01460.t01 | Wine grape | cytosol, nucleus, plastid, vacuole | 57.6 | 17.65 |
| VIT_08s0058g01480.t01 | Wine grape | cytosol, mitochondrion, vacuole | 58.4 | 16.29 |
| Solyc10g074920.1.1 | Tomato | extracellular | 58.4 | 16.26 |
| PGSC0003DMT400080203 | Potato | endoplasmic reticulum | 58.4 | 16.26 |
| KRH00473 | Soybean | nucleus | 56.8 | 15.37 |
| CDY11173 | Canola | endoplasmic reticulum, vacuole | 52.8 | 14.93 |
| KRH64877 | Soybean | endoplasmic reticulum | 55.2 | 14.9 |
| KRH40712 | Soybean | nucleus | 56.0 | 14.31 |
| AT5G01930.1 | Thale cress | endoplasmic reticulum | 50.4 | 14.06 |
| KRH09553 | Soybean | endoplasmic reticulum, plastid, vacuole | 53.6 | 13.51 |
| HORVU5Hr1G115310.4 | Barley | golgi, vacuole | 40.0 | 12.47 |
| HORVU0Hr1G017220.2 | Barley | mitochondrion, vacuole | 42.4 | 12.24 |
| HORVU3Hr1G071210.3 | Barley | extracellular, plasma membrane, vacuole | 42.4 | 11.32 |
| HORVU7Hr1G045910.1 | Barley | vacuole | 39.2 | 11.21 |
| HORVU3Hr1G060060.8 | Barley | golgi, vacuole | 40.0 | 11.21 |
| Bra005662.1-P | Field mustard | nucleus | 52.8 | 10.41 |
| CDY61603 | Canola | nucleus | 26.4 | 4.68 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G036770.2 | EnsemblPlantsGene:HORVU6Hr1G036770 | Gene3D:3.20.20.80 | InterPro:Glycoside_hydrolase_SF | PANTHER:PTHR31451 | PANTHER:PTHR31451:SF9 |
| SUPFAM:SSF51445 | UniParc:UPI000B463D06 | UniProt:A0A287TXN9 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrchr6H:+:182690966..182692781
Molecular Weight (calculated)
14056.5 Da
IEP (calculated)
5.187
GRAVY (calculated)
-0.526
Length
125 amino acids
Sequence
(BLAST)
(BLAST)
001: METIGGREPV HGWRGSNPQE VDPRRPTSSP MHFSALDFVV SKAKSYKMRL ILSLCNNWED YGGKAQYVRW GKEAGVDLTS DDDFFSDPTL KGYYKAFVEA
101: VLSRINTITN EAYKDDPTIL CLGAD
101: VLSRINTITN EAYKDDPTIL CLGAD
001: MKDQLGFRIV LCSAVFIILT QNRALADLDS ESHEVNSESV GEEQWEMVQR KGMQFTLNGQ PFYVNGFNTY WMMTLAADNS TRGKVTEVFQ QASAVGMTVG
101: RTWAFNDGQW RALQKSPSVY DEEVFKALDF VLSEARKYKI RLILSLVNNW DAYGGKAQYV KWGNASGLNL TSDDDFFTNP TLRNFYQSHV RTVLNRVNTF
201: TNITYKNDPT IFAWELMNEP RCPSDPSGDK LQSWIQEMAV FVKSLDAKHL VEIGLEGFYG PSAPARTRFN PNPYAAQVGT DFIRNNQVLG IDFASVHVYP
301: DSWISPAVSN SFLEFTSSWM QAHVEDAEMY LGMPVLFTEF GVSAHDPGFN TSFRDMMLNT VYKMTLNSTR KGGAGAGSLV WQVFPQGAEF MDDGYAVYLT
401: RAHTASKIIS LQSKRLAIFN SLCSWRCRWG CKKKNQTALD ALLSHDEL
101: RTWAFNDGQW RALQKSPSVY DEEVFKALDF VLSEARKYKI RLILSLVNNW DAYGGKAQYV KWGNASGLNL TSDDDFFTNP TLRNFYQSHV RTVLNRVNTF
201: TNITYKNDPT IFAWELMNEP RCPSDPSGDK LQSWIQEMAV FVKSLDAKHL VEIGLEGFYG PSAPARTRFN PNPYAAQVGT DFIRNNQVLG IDFASVHVYP
301: DSWISPAVSN SFLEFTSSWM QAHVEDAEMY LGMPVLFTEF GVSAHDPGFN TSFRDMMLNT VYKMTLNSTR KGGAGAGSLV WQVFPQGAEF MDDGYAVYLT
401: RAHTASKIIS LQSKRLAIFN SLCSWRCRWG CKKKNQTALD ALLSHDEL
Arabidopsis Description
MAN6Mannan endo-1,4-beta-mannosidase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZV3]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.