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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • mitochondrion 3
  • vacuole 1
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G145900.1 Wheat cytosol 90.24 98.19
TraesCS5A01G146400.1 Wheat mitochondrion, plasma membrane, plastid, vacuole 96.9 96.9
TraesCS5B01G145200.1 Wheat mitochondrion, plasma membrane, vacuole 95.95 95.95
HORVU4Hr1G058920.3 Barley cytosol 37.14 92.86
HORVU3Hr1G057870.3 Barley cytosol 35.71 92.59
HORVU5Hr1G083060.1 Barley cytosol, plastid, vacuole 30.0 81.82
Os12t0117300-00 Rice cytosol 74.05 81.41
HORVU3Hr1G003960.2 Barley cytosol 22.14 80.87
Os11t0118200-01 Rice cytosol 38.81 80.69
HORVU5Hr1G083020.2 Barley extracellular, mitochondrion, plastid, vacuole 24.52 79.84
HORVU6Hr1G036770.2 Barley cytosol 21.19 71.2
EES09143 Sorghum cytosol, plasma membrane, plastid, vacuole 72.38 71.19
Zm00001d005052_P002 Maize plasma membrane 72.38 70.21
GSMUA_Achr7P22010_001 Banana cytosol 63.33 64.25
VIT_08s0058g01460.t01 Wine grape cytosol, nucleus, plastid, vacuole 53.33 54.9
HORVU6Hr1G009620.1 Barley cytosol 19.76 52.87
VIT_08s0058g01480.t01 Wine grape cytosol, mitochondrion, vacuole 54.76 51.34
Solyc10g074920.1.1 Tomato extracellular 54.05 50.56
PGSC0003DMT400080203 Potato endoplasmic reticulum 53.57 50.11
KRH64877 Soybean endoplasmic reticulum 52.86 47.95
KRH00473 Soybean nucleus 52.14 47.4
CDY11173 Canola endoplasmic reticulum, vacuole 49.29 46.83
AT5G01930.1 Thale cress endoplasmic reticulum 48.57 45.54
KRH40712 Soybean nucleus 51.9 44.58
KRH09553 Soybean endoplasmic reticulum, plastid, vacuole 52.14 44.15
HORVU3Hr1G060060.8 Barley golgi, vacuole 42.62 40.13
HORVU3Hr1G071210.3 Barley extracellular, plasma membrane, vacuole 44.29 39.74
HORVU0Hr1G017220.2 Barley mitochondrion, vacuole 40.24 39.03
HORVU7Hr1G045910.1 Barley vacuole 37.62 36.16
HORVU5Hr1G115310.4 Barley golgi, vacuole 34.05 35.66
Bra005662.1-P Field mustard nucleus 50.24 33.28
CDY61603 Canola nucleus 41.9 24.96
Protein Annotations
EnsemblPlants:HORVU5Hr1G046370.1EnsemblPlantsGene:HORVU5Hr1G046370Gene3D:3.20.20.80GO:GO:0003674GO:GO:0003824GO:GO:0004553
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016787GO:GO:0016798InterPro:Glyco_hydro_5
InterPro:Glyco_hydro_5_CSInterPro:Glycoside_hydrolase_SFPANTHER:PTHR31451PANTHER:PTHR31451:SF9PFAM:PF00150ScanProsite:PS00659
SEG:segSUPFAM:SSF51445UniParc:UPI000B46EA7DUniProt:A0A287R1Q8MapMan:21.2.3.2.2:
Description
No Description!
Coordinates
chrchr5H:+:360098081..360101296
Molecular Weight (calculated)
46967.2 Da
IEP (calculated)
4.351
GRAVY (calculated)
-0.177
Length
420 amino acids
Sequence
(BLAST)
001: MGDMMCRAPA TARSTTTPRI PLLPYVFLGL ASTVMSQEAD AEEEWAAVER RGAHLVTGAA ERPFIIHGFN TYWLMSFAAD EATRPRVTAA IAEAAGAGLN
101: VCRTWAFADG GYHALQTAPF CYDEEVFQAL DFVVSEARRY KMRLILSLCN NWEDYGGKAQ YVRWGKEAGV DLTSDDDFFS DPTLKGYYKA FVEAVLSRIN
201: TITNEAYKED PTILAWELIN EPRCPSDPSG DTLQAWIEEM ASYVKSIDTV HLVEIGIEGY YGPSTPELLL VNPDDYSGHV GTDFIRNHQT LGIDLASVHI
301: YSDTWLPDST EERHVQFVNT WMQQHIDDAA NLLAMPIVIG EFGLSLKDGK FENEFRETFM QTVYNNFLGS WESGMIGGGC LLWQLFPEGA EHMDDGYAVI
401: FAKSPSTFNL LANHSRKLEC
Best Arabidopsis Sequence Match ( AT5G01930.1 )
(BLAST)
001: MKDQLGFRIV LCSAVFIILT QNRALADLDS ESHEVNSESV GEEQWEMVQR KGMQFTLNGQ PFYVNGFNTY WMMTLAADNS TRGKVTEVFQ QASAVGMTVG
101: RTWAFNDGQW RALQKSPSVY DEEVFKALDF VLSEARKYKI RLILSLVNNW DAYGGKAQYV KWGNASGLNL TSDDDFFTNP TLRNFYQSHV RTVLNRVNTF
201: TNITYKNDPT IFAWELMNEP RCPSDPSGDK LQSWIQEMAV FVKSLDAKHL VEIGLEGFYG PSAPARTRFN PNPYAAQVGT DFIRNNQVLG IDFASVHVYP
301: DSWISPAVSN SFLEFTSSWM QAHVEDAEMY LGMPVLFTEF GVSAHDPGFN TSFRDMMLNT VYKMTLNSTR KGGAGAGSLV WQVFPQGAEF MDDGYAVYLT
401: RAHTASKIIS LQSKRLAIFN SLCSWRCRWG CKKKNQTALD ALLSHDEL
Arabidopsis Description
MAN6Mannan endo-1,4-beta-mannosidase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZV3]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.