Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- vacuole 1
- peroxisome 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS5D01G145900.1 | Wheat | cytosol | 90.24 | 98.19 |
TraesCS5A01G146400.1 | Wheat | mitochondrion, plasma membrane, plastid, vacuole | 96.9 | 96.9 |
TraesCS5B01G145200.1 | Wheat | mitochondrion, plasma membrane, vacuole | 95.95 | 95.95 |
HORVU4Hr1G058920.3 | Barley | cytosol | 37.14 | 92.86 |
HORVU3Hr1G057870.3 | Barley | cytosol | 35.71 | 92.59 |
HORVU5Hr1G083060.1 | Barley | cytosol, plastid, vacuole | 30.0 | 81.82 |
Os12t0117300-00 | Rice | cytosol | 74.05 | 81.41 |
HORVU3Hr1G003960.2 | Barley | cytosol | 22.14 | 80.87 |
Os11t0118200-01 | Rice | cytosol | 38.81 | 80.69 |
HORVU5Hr1G083020.2 | Barley | extracellular, mitochondrion, plastid, vacuole | 24.52 | 79.84 |
HORVU6Hr1G036770.2 | Barley | cytosol | 21.19 | 71.2 |
EES09143 | Sorghum | cytosol, plasma membrane, plastid, vacuole | 72.38 | 71.19 |
Zm00001d005052_P002 | Maize | plasma membrane | 72.38 | 70.21 |
GSMUA_Achr7P22010_001 | Banana | cytosol | 63.33 | 64.25 |
VIT_08s0058g01460.t01 | Wine grape | cytosol, nucleus, plastid, vacuole | 53.33 | 54.9 |
HORVU6Hr1G009620.1 | Barley | cytosol | 19.76 | 52.87 |
VIT_08s0058g01480.t01 | Wine grape | cytosol, mitochondrion, vacuole | 54.76 | 51.34 |
Solyc10g074920.1.1 | Tomato | extracellular | 54.05 | 50.56 |
PGSC0003DMT400080203 | Potato | endoplasmic reticulum | 53.57 | 50.11 |
KRH64877 | Soybean | endoplasmic reticulum | 52.86 | 47.95 |
KRH00473 | Soybean | nucleus | 52.14 | 47.4 |
CDY11173 | Canola | endoplasmic reticulum, vacuole | 49.29 | 46.83 |
AT5G01930.1 | Thale cress | endoplasmic reticulum | 48.57 | 45.54 |
KRH40712 | Soybean | nucleus | 51.9 | 44.58 |
KRH09553 | Soybean | endoplasmic reticulum, plastid, vacuole | 52.14 | 44.15 |
HORVU3Hr1G060060.8 | Barley | golgi, vacuole | 42.62 | 40.13 |
HORVU3Hr1G071210.3 | Barley | extracellular, plasma membrane, vacuole | 44.29 | 39.74 |
HORVU0Hr1G017220.2 | Barley | mitochondrion, vacuole | 40.24 | 39.03 |
HORVU7Hr1G045910.1 | Barley | vacuole | 37.62 | 36.16 |
HORVU5Hr1G115310.4 | Barley | golgi, vacuole | 34.05 | 35.66 |
Bra005662.1-P | Field mustard | nucleus | 50.24 | 33.28 |
CDY61603 | Canola | nucleus | 41.9 | 24.96 |
Protein Annotations
EnsemblPlants:HORVU5Hr1G046370.1 | EnsemblPlantsGene:HORVU5Hr1G046370 | Gene3D:3.20.20.80 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 |
GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0016798 | InterPro:Glyco_hydro_5 |
InterPro:Glyco_hydro_5_CS | InterPro:Glycoside_hydrolase_SF | PANTHER:PTHR31451 | PANTHER:PTHR31451:SF9 | PFAM:PF00150 | ScanProsite:PS00659 |
SEG:seg | SUPFAM:SSF51445 | UniParc:UPI000B46EA7D | UniProt:A0A287R1Q8 | MapMan:21.2.3.2.2 | : |
Description
No Description!
Coordinates
chrchr5H:+:360098081..360101296
Molecular Weight (calculated)
46967.2 Da
IEP (calculated)
4.351
GRAVY (calculated)
-0.177
Length
420 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDMMCRAPA TARSTTTPRI PLLPYVFLGL ASTVMSQEAD AEEEWAAVER RGAHLVTGAA ERPFIIHGFN TYWLMSFAAD EATRPRVTAA IAEAAGAGLN
101: VCRTWAFADG GYHALQTAPF CYDEEVFQAL DFVVSEARRY KMRLILSLCN NWEDYGGKAQ YVRWGKEAGV DLTSDDDFFS DPTLKGYYKA FVEAVLSRIN
201: TITNEAYKED PTILAWELIN EPRCPSDPSG DTLQAWIEEM ASYVKSIDTV HLVEIGIEGY YGPSTPELLL VNPDDYSGHV GTDFIRNHQT LGIDLASVHI
301: YSDTWLPDST EERHVQFVNT WMQQHIDDAA NLLAMPIVIG EFGLSLKDGK FENEFRETFM QTVYNNFLGS WESGMIGGGC LLWQLFPEGA EHMDDGYAVI
401: FAKSPSTFNL LANHSRKLEC
101: VCRTWAFADG GYHALQTAPF CYDEEVFQAL DFVVSEARRY KMRLILSLCN NWEDYGGKAQ YVRWGKEAGV DLTSDDDFFS DPTLKGYYKA FVEAVLSRIN
201: TITNEAYKED PTILAWELIN EPRCPSDPSG DTLQAWIEEM ASYVKSIDTV HLVEIGIEGY YGPSTPELLL VNPDDYSGHV GTDFIRNHQT LGIDLASVHI
301: YSDTWLPDST EERHVQFVNT WMQQHIDDAA NLLAMPIVIG EFGLSLKDGK FENEFRETFM QTVYNNFLGS WESGMIGGGC LLWQLFPEGA EHMDDGYAVI
401: FAKSPSTFNL LANHSRKLEC
001: MKDQLGFRIV LCSAVFIILT QNRALADLDS ESHEVNSESV GEEQWEMVQR KGMQFTLNGQ PFYVNGFNTY WMMTLAADNS TRGKVTEVFQ QASAVGMTVG
101: RTWAFNDGQW RALQKSPSVY DEEVFKALDF VLSEARKYKI RLILSLVNNW DAYGGKAQYV KWGNASGLNL TSDDDFFTNP TLRNFYQSHV RTVLNRVNTF
201: TNITYKNDPT IFAWELMNEP RCPSDPSGDK LQSWIQEMAV FVKSLDAKHL VEIGLEGFYG PSAPARTRFN PNPYAAQVGT DFIRNNQVLG IDFASVHVYP
301: DSWISPAVSN SFLEFTSSWM QAHVEDAEMY LGMPVLFTEF GVSAHDPGFN TSFRDMMLNT VYKMTLNSTR KGGAGAGSLV WQVFPQGAEF MDDGYAVYLT
401: RAHTASKIIS LQSKRLAIFN SLCSWRCRWG CKKKNQTALD ALLSHDEL
101: RTWAFNDGQW RALQKSPSVY DEEVFKALDF VLSEARKYKI RLILSLVNNW DAYGGKAQYV KWGNASGLNL TSDDDFFTNP TLRNFYQSHV RTVLNRVNTF
201: TNITYKNDPT IFAWELMNEP RCPSDPSGDK LQSWIQEMAV FVKSLDAKHL VEIGLEGFYG PSAPARTRFN PNPYAAQVGT DFIRNNQVLG IDFASVHVYP
301: DSWISPAVSN SFLEFTSSWM QAHVEDAEMY LGMPVLFTEF GVSAHDPGFN TSFRDMMLNT VYKMTLNSTR KGGAGAGSLV WQVFPQGAEF MDDGYAVYLT
401: RAHTASKIIS LQSKRLAIFN SLCSWRCRWG CKKKNQTALD ALLSHDEL
Arabidopsis Description
MAN6Mannan endo-1,4-beta-mannosidase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZV3]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.