CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, vacuole, cytosol

Predictor Summary:

plastid 3
vacuole 1
mitochondrion 1
cytosol 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d005052_P002	Maize	plasma membrane	91.33	90.07
HORVU4Hr1G058920.3	Barley	cytosol	30.91	78.57
HORVU3Hr1G057870.3	Barley	cytosol	29.51	77.78
Os12t0117300-00	Rice	cytosol	69.09	77.23
TraesCS5D01G145900.1	Wheat	cytosol	69.56	76.94
Os11t0118200-01	Rice	cytosol	35.36	74.75
TraesCS5A01G146400.1	Wheat	mitochondrion, plasma membrane, plastid, vacuole	71.19	72.38
HORVU5Hr1G046370.1	Barley	mitochondrion	71.19	72.38
TraesCS5B01G145200.1	Wheat	mitochondrion, plasma membrane, vacuole	70.96	72.14
HORVU5Hr1G083060.1	Barley	cytosol, plastid, vacuole	25.06	69.48
HORVU5Hr1G083020.2	Barley	extracellular, mitochondrion, plastid, vacuole	20.37	67.44
HORVU3Hr1G003960.2	Barley	cytosol	17.8	66.09
GSMUA_Achr7P22010_001	Banana	cytosol	63.23	65.22
HORVU6Hr1G036770.2	Barley	cytosol	17.8	60.8
VIT_08s0058g01460.t01	Wine grape	cytosol, nucleus, plastid, vacuole	51.29	53.68
Solyc10g074920.1.1	Tomato	extracellular	52.69	50.11
PGSC0003DMT400080203	Potato	endoplasmic reticulum	52.46	49.89
VIT_08s0058g01480.t01	Wine grape	cytosol, mitochondrion, vacuole	52.22	49.78
HORVU6Hr1G009620.1	Barley	cytosol	18.27	49.68
KRH64877	Soybean	endoplasmic reticulum	52.46	48.38
KRH00473	Soybean	nucleus	51.05	47.19
OQU79706	Sorghum	vacuole	34.19	46.79
CDY11173	Canola	endoplasmic reticulum, vacuole	47.78	46.15
AT5G01930.1	Thale cress	endoplasmic reticulum	47.31	45.09
KXG31170	Sorghum	golgi, vacuole	43.56	45.04
KRH09553	Soybean	endoplasmic reticulum, plastid, vacuole	51.76	44.56
KRH40712	Soybean	nucleus	50.82	44.38
EES01213	Sorghum	golgi, vacuole	43.33	42.82
EER93344	Sorghum	mitochondrion	51.05	42.75
EES03598	Sorghum	endoplasmic reticulum, vacuole	44.5	41.21
OQU76322	Sorghum	golgi, vacuole	37.0	36.07
Bra005662.1-P	Field mustard	nucleus	49.41	33.28
OQU90687	Sorghum	mitochondrion	39.11	30.47
CDY61603	Canola	nucleus	42.15	25.53

Protein Annotations

MapMan:21.2.3.2.2	Gene3D:3.20.20.80	UniProt:C5Y3I6	EnsemblPlants:EES09143	ProteinID:EES09143	ProteinID:EES09143.2
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009791	GO:GO:0009845	GO:GO:0009987	GO:GO:0016787
GO:GO:0016798	GO:GO:0016985	GO:GO:0046355	InterPro:Glyco_hydro_5	InterPro:Glyco_hydro_5_CS	InterPro:Glycoside_hydrolase_SF
PFAM:PF00150	ScanProsite:PS00659	PANTHER:PTHR31451	PANTHER:PTHR31451:SF9	EnsemblPlantsGene:SORBI_3005G014600	SUPFAM:SSF51445
UniParc:UPI00081ACCDF	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:1323233..1326795

Molecular Weight (calculated)

47502.3 Da

IEP (calculated)

5.923

GRAVY (calculated)

-0.127

Length

427 amino acids

Sequence
(BLAST)

001: MESAWEWSSP TCPRLAAPPL QATPRVSLLH CVLLAASCCI PLAMPPGGAN EGEWAAVERR GPHLWASGRP FVVHGFNTYW LMYFAGDPAT RPAVTAALAD
101: AAGAGLNVCR TWAFNDGGYR ALQLKPFSYD EEVFQALDFV ISEARNHKVR LILSLCNNWK DYGGKAQYVR WGKEAGLHLT SDDAFFSDAT IKSYYKAFVK
201: AVLTRKNTIT NVAYMDDPTI LAWELINEPH CHSDPSGDTL QAWIEEMASY VKSIDPVHLL EIGVEGYYGP STPELLHVNP DAYSGTIGTD FIRNHRALGI
301: DLASIHIYSD NWLPHSEEDS HLQFVKTWMQ QHIDDAANLL GMPILIGEFG VSLKCGKFGH KFREAFMETV YSTFLRSWKS GVIGGGCLVW QLFPESTEHM
401: DDGYAVFFAK SPSTLKLLTD HSRSLES

Best Arabidopsis Sequence Match ( AT5G01930.1 )
(BLAST)

001: MKDQLGFRIV LCSAVFIILT QNRALADLDS ESHEVNSESV GEEQWEMVQR KGMQFTLNGQ PFYVNGFNTY WMMTLAADNS TRGKVTEVFQ QASAVGMTVG
101: RTWAFNDGQW RALQKSPSVY DEEVFKALDF VLSEARKYKI RLILSLVNNW DAYGGKAQYV KWGNASGLNL TSDDDFFTNP TLRNFYQSHV RTVLNRVNTF
201: TNITYKNDPT IFAWELMNEP RCPSDPSGDK LQSWIQEMAV FVKSLDAKHL VEIGLEGFYG PSAPARTRFN PNPYAAQVGT DFIRNNQVLG IDFASVHVYP
301: DSWISPAVSN SFLEFTSSWM QAHVEDAEMY LGMPVLFTEF GVSAHDPGFN TSFRDMMLNT VYKMTLNSTR KGGAGAGSLV WQVFPQGAEF MDDGYAVYLT
401: RAHTASKIIS LQSKRLAIFN SLCSWRCRWG CKKKNQTALD ALLSHDEL

Arabidopsis Description

MAN6Mannan endo-1,4-beta-mannosidase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZV3]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.