CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 5
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045873_P002	Maize	vacuole	90.18	90.8
TraesCS7D01G225500.1	Wheat	vacuole	79.0	80.65
HORVU7Hr1G045910.1	Barley	vacuole	79.22	79.41
TraesCS7B01G190600.1	Wheat	vacuole	78.77	78.95
Os06t0311600-01	Rice	golgi, vacuole	79.22	78.86
GSMUA_Achr5P22340_001	Banana	cytosol	61.64	68.53
TraesCS7A01G223800.1	Wheat	cytosol	60.5	66.75
GSMUA_Achr8P24410_001	Banana	mitochondrion	51.37	64.1
VIT_00s0187g00280.t01	Wine grape	golgi, vacuole	59.82	58.35
VIT_00s0187g00320.t01	Wine grape	golgi, vacuole	59.36	57.65
PGSC0003DMT400034535	Potato	cytosol, nucleus, vacuole	49.09	54.43
Solyc11g012190.1.1	Tomato	golgi, vacuole	50.91	48.8
EES03598	Sorghum	endoplasmic reticulum, vacuole	46.58	44.25
PGSC0003DMT400034545	Potato	cytosol	20.55	43.9
KXG31170	Sorghum	golgi, vacuole	37.67	39.95
OQU79706	Sorghum	vacuole	28.08	39.42
EES01213	Sorghum	golgi, vacuole	38.81	39.35
EES09143	Sorghum	cytosol, plasma membrane, plastid, vacuole	36.07	37.0
EER93344	Sorghum	mitochondrion	38.58	33.14
OQU90687	Sorghum	mitochondrion	35.16	28.1

Protein Annotations

MapMan:21.2.3.2.2	Gene3D:3.20.20.80	EntrezGene:8078241	UniProt:A0A1W0VSR8	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798
InterPro:Glyco_hydro_5	InterPro:Glycoside_hydrolase_SF	EnsemblPlants:OQU76322	ProteinID:OQU76322	ProteinID:OQU76322.1	PFAM:PF00150
PANTHER:PTHR31451	PANTHER:PTHR31451:SF1	EnsemblPlantsGene:SORBI_3010G130300	SUPFAM:SSF51445	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0001A88F2D	RefSeq:XP_002436944.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:17602360..17606572

Molecular Weight (calculated)

49299.0 Da

IEP (calculated)

7.799

GRAVY (calculated)

-0.203

Length

438 amino acids

Sequence
(BLAST)

001: MWRGTRMYSL LGVFLLLSLA YLNWLPGRDP SSAGGPGGFK LPVPWLQPRM SFVGRAGTHF VDAVTGAPIY VNGWNSYWLL SARSPALSAE MLRRGRRMGL
101: TVCRTWAFSD GGPGALQISP GRFSEPVFQM LDYVIYEARR NHVRLILCLV NNLDNFGGKA QYVQWAQAAG VNVTNSMDSF FSHPTIKYYY MEYVKAILTR
201: RNSYSGIKYC DEPAIFAWEL MNEPRCVSNS SGPHIQAWIE EMSAYIKSLD TKHLITVGIE GFYGPGRGDR LGVNPGDWAA SLCSDFIQNS AVKDIDFASV
301: HAYPDSWLPK ASMEEKVKYL SVWVDSHLND SEYILRKPVL FSEVGYLQHA EADNTLDGDT LLKVVYDKLY NSAKKLQAGG GALIWQLMVE GMQMYHDNFS
401: MVARDRPSTY KLINEQSCRL QRLYGTEGDP SWQCSLPP

Best Arabidopsis Sequence Match ( AT4G28320.1 )
(BLAST)

001: MVPTRNRPML RILGFFICAA FIYLSFRDLW LNHKGKAKLG FVKRNGTQFV VDDKPLYVNG WNSYWFMDHA VDEHSRNLVG EMLEAGAKMG LTVCRTWAFN
101: DGGYNALQIS PGRFDERVFQ ALDHVIAEAR KHDVRLLLSL VNNLQAYGGK TQYVKWAWQE GVGLSSSNDS FFFDPSIRNY FKNYLKVLLT RKNSVTGIEY
201: RNDPTIFAWE LINEPRCTTD VSGKTLQDWI DEMTGFIKSI DDKHLLTVGL EGFYGPNSPK GLTVNPEQWA SQLGTDFVQN SNSSNIDFAS VHIYPDHWFH
301: NQTFEEKLKF VVKWMQSHIE DGLKELKKPV LFTEFGLSNQ NKDYEPSQRD KFYRIIFDVV YKSAKRKKSG AGTLVWQLFM EGMETFNDDF GIVPHEQDSI
401: YKLMIEQSCR LGKVTGRLKE QKLKELCSHR H

Arabidopsis Description

MAN5Mannan endo-1,4-beta-mannosidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0H6]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.