Factsheet for GSMUA_Achr8P24410_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P22340_001	Banana	cytosol	79.49	70.81
TraesCS7D01G225500.1	Wheat	vacuole	65.24	53.38
PGSC0003DMT400034535	Potato	cytosol, nucleus, vacuole	59.83	53.16
TraesCS7B01G190600.1	Wheat	vacuole	64.67	51.95
HORVU7Hr1G045910.1	Barley	vacuole	64.39	51.72
OQU76322	Sorghum	golgi, vacuole	64.1	51.37
Zm00001d045873_P002	Maize	vacuole	63.53	51.26
Os06t0311600-01	Rice	golgi, vacuole	64.1	51.14
VIT_00s0187g00280.t01	Wine grape	golgi, vacuole	61.54	48.11
VIT_00s0187g00320.t01	Wine grape	golgi, vacuole	60.97	47.45
TraesCS7A01G223800.1	Wheat	cytosol	53.28	47.1
Solyc11g012190.1.1	Tomato	golgi, vacuole	58.97	45.3
PGSC0003DMT400034545	Potato	cytosol	24.5	41.95
GSMUA_Achr1P04970_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	51.28	41.28
GSMUA_Achr5P09360_001	Banana	endoplasmic reticulum, extracellular, vacuole	45.58	40.82
GSMUA_Achr8P20030_001	Banana	golgi, plastid, vacuole	47.86	37.5
GSMUA_Achr6P12740_001	Banana	extracellular, vacuole	26.21	36.65
GSMUA_Achr6P27200_001	Banana	golgi, vacuole	42.17	36.27
GSMUA_Achr4P07870_001	Banana	mitochondrion	39.6	36.1
GSMUA_Achr4P02940_001	Banana	golgi, vacuole	43.02	35.45
GSMUA_Achr6P30560_001	Banana	vacuole	41.88	35.34
GSMUA_Achr10P...	Banana	nucleus, plasma membrane, plastid, vacuole	47.86	34.85
GSMUA_Achr7P22010_001	Banana	cytosol	41.03	34.78
GSMUA_Achr9P06930_001	Banana	extracellular	41.88	34.35
GSMUA_Achr6P12730_001	Banana	golgi, vacuole	39.6	33.82
GSMUA_Achr6P28970_001	Banana	extracellular, golgi	20.23	32.27
GSMUA_Achr9P08250_001	Banana	vacuole	40.74	31.78
GSMUA_Achr3P12210_001	Banana	cytosol	41.88	30.88
GSMUA_Achr3P09750_001	Banana	endoplasmic reticulum	40.74	30.82

Protein Annotations

EnsemblPlants:GSMUA_Achr8P24410_001	EnsemblPlants:GSMUA_Achr8T24410_001	EnsemblPlantsGene:GSMUA_Achr8G24410_001	Gene3D:3.20.20.80	InterPro:Glycoside_hydrolase_SF	PANTHER:PTHR31451
PANTHER:PTHR31451:SF1	SUPFAM:SSF51445	UniParc:UPI000295DC9D	UniProt:M0TT94	MapMan:35.1	:

Description

Mannan endo-1,4-beta-mannosidase 6 [Source:GMGC_GENE;Acc:GSMUA_Achr8G24410_001]

Coordinates

chr8:-:28596586..28600110

Molecular Weight (calculated)

39908.7 Da

IEP (calculated)

7.602

GRAVY (calculated)

-0.256

Length

351 amino acids

Sequence
(BLAST)

001: MGFVGRNGTR FVNIRDGSPV YVNGWNSYWL MSSDSGDRVV EMLRRGRSLG MSVCQTWAFS DGGANALQIS PGRFDERIFQ ALDFVIYEAR RHHIRLILSP
101: VNNLNPFGGK AQYVMWAQAA GDYVKAIITR KNSYSGVRYS DEPAIFAWEL INESRCESNS SGPLLQAWTA EMASYINSLD GKHLITVGLE GFYGLRRTER
201: LRNIDFSLEH AYPDSWIPKA SLEDKVKYLS IWVDSHVNDS EHVLKKPVLF AEVGSQLHVK RNGTYDRNIL LKIVYDKVYE STKMGRAGVG ALIWQLMVEG
301: VLRFQDQFSL IASEHPSTYD LILQLSCRLR NFLMKKENAS EVEETCLELP P

Best Arabidopsis Sequence Match ( AT2G20680.1 )
(BLAST)

001: MAAPTGNGPV IPILGFLTCV AFIYLSFGDL WFGLKTEGEL AFVKRNGTQF VVDGKALYVN GWNSYWFMDH AVNDHSRHRV SAMLEAGAKM GLTVCRTWAF
101: NDGGYNALQI SPGRFDERVF KALDHVIAEA KTHGVRLLLS LVNNLQAYGG KTQYVNWAWQ EGVGLSSSND SFFFDPSIRR YFKNYLTVLL TRKNSLTGIE
201: YRNDPTIFAW ELINEPRCMS DVSGDTLQDW INEMTAFIKS IDNKHLLTVG LEGFYGPSSP KKLTVNPERW ASELGSDFVR NSDSPNIDFA SVHIYPDHWF
301: HDQGFEEKLK FVVKWMLSHI EDGDKELKKP VLFTEFGLSN LNKDYDPSQR DRFYRTIFDV IYKSAKRKRS GAGTLVWQFL IEGMEGFNDD FGIVPWEQDS
401: IQRLMIEQSC RLSRITGRHL LDKKSIEMCS HRP

Arabidopsis Description

MAN2Mannan endo-1,4-beta-mannosidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q7Y223]
SUBAcon: [plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.