Factsheet for GSMUA_Achr3P09750_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 1
mitochondrion 1
endoplasmic reticulum 5
cytosol 1
extracellular 3
vacuole 3
plasma membrane 3
golgi 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_08s0058g01460.t01	Wine grape	cytosol, nucleus, plastid, vacuole	57.97	65.93
Solyc10g074920.1.1	Tomato	extracellular	59.7	61.69
PGSC0003DMT400080203	Potato	endoplasmic reticulum	59.48	61.47
CDY11173	Canola	endoplasmic reticulum, vacuole	57.97	60.86
VIT_08s0058g01480.t01	Wine grape	cytosol, mitochondrion, vacuole	58.19	60.27
AT5G01930.1	Thale cress	endoplasmic reticulum	57.76	59.82
KRH00473	Soybean	nucleus	59.27	59.52
KRH64877	Soybean	endoplasmic reticulum	58.84	58.96
GSMUA_Achr7P22010_001	Banana	cytosol	52.16	58.45
KRH40712	Soybean	nucleus	59.7	56.65
KRH09553	Soybean	endoplasmic reticulum, plastid, vacuole	57.33	53.63
GSMUA_Achr6P12740_001	Banana	extracellular, vacuole	26.51	49.0
GSMUA_Achr4P07870_001	Banana	mitochondrion	38.58	46.49
GSMUA_Achr6P27200_001	Banana	golgi, vacuole	40.73	46.32
GSMUA_Achr6P30560_001	Banana	vacuole	40.52	45.19
GSMUA_Achr9P06930_001	Banana	extracellular	41.38	44.86
Bra005662.1-P	Field mustard	nucleus	59.91	43.85
GSMUA_Achr4P02940_001	Banana	golgi, vacuole	40.09	43.66
GSMUA_Achr6P12730_001	Banana	golgi, vacuole	38.15	43.07
GSMUA_Achr5P22340_001	Banana	cytosol	35.99	42.39
GSMUA_Achr5P09360_001	Banana	endoplasmic reticulum, extracellular, vacuole	35.78	42.35
GSMUA_Achr9P08250_001	Banana	vacuole	40.09	41.33
GSMUA_Achr8P24410_001	Banana	mitochondrion	30.82	40.74
GSMUA_Achr1P04970_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	38.15	40.6
GSMUA_Achr6P28970_001	Banana	extracellular, golgi	19.18	40.45
GSMUA_Achr3P12210_001	Banana	cytosol	40.95	39.92
GSMUA_Achr8P20030_001	Banana	golgi, plastid, vacuole	37.07	38.39
GSMUA_Achr10P...	Banana	nucleus, plasma membrane, plastid, vacuole	37.07	35.68
CDY61603	Canola	nucleus	51.94	34.18

Protein Annotations

EnsemblPlants:GSMUA_Achr3P09750_001	EnsemblPlants:GSMUA_Achr3T09750_001	EnsemblPlantsGene:GSMUA_Achr3G09750_001	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798
InterPro:Glyco_hydro_5	InterPro:Glycoside_hydrolase_SF	PANTHER:PTHR31451	PANTHER:PTHR31451:SF17	PFAM:PF00150	SEG:seg
SignalP:SignalP-TM	SUPFAM:SSF51445	UniParc:UPI00029520A6	UniProt:M0SD92	MapMan:21.2.3.2.2	:

Description

Mannan endo-1,4-beta-mannosidase 6 [Source:GMGC_GENE;Acc:GSMUA_Achr3G09750_001]

Coordinates

chr3:+:7067353..7069536

Molecular Weight (calculated)

51907.1 Da

IEP (calculated)

7.832

GRAVY (calculated)

-0.409

Length

464 amino acids

Sequence
(BLAST)

001: MAMNKEKNTI TTSLSLLRQC FLLLTIFLAV NGRTNAALPG QTEQDHNGRV HDMDGVGDEW GVVERKGNQF VVGGQPFYFN GFNTYWLLML AVDKSTRGKV
101: SDVFRQASSI GLTVCRTWAF NDGGWRALQK SPSVYDEDVF QAFDFVLSEA KKYKIRLVLP LVNNWESYGG KAQYVRWGNA SGLNLTSDDD FFSDPTVKGY
201: YKAHVKVLLN RANTFTNITY KDDPTIFAWE LMNEPRCPSD PSGDKLQEWI QEMAFHVKSI DSVHLLGTGT EGFYGPPSHE RLQLNPNAVA GQVGTDFIRN
301: HKALGIDYAS AHLYPDAWLP KSGSNDYAQF ATTWIQGHTD DADAALRMPV VFGEFGVSSS KAGRSNSTQR NTFIAAVYAA MLNSTKRGGS GGGCLLWQVF
401: PEGTEYMDDG YAVVLTKAPN TSNILALQSK RMQIFNSRCS WRCHWNCKKK NRTDHDARLP RDEL

Best Arabidopsis Sequence Match ( AT5G01930.1 )
(BLAST)

001: MKDQLGFRIV LCSAVFIILT QNRALADLDS ESHEVNSESV GEEQWEMVQR KGMQFTLNGQ PFYVNGFNTY WMMTLAADNS TRGKVTEVFQ QASAVGMTVG
101: RTWAFNDGQW RALQKSPSVY DEEVFKALDF VLSEARKYKI RLILSLVNNW DAYGGKAQYV KWGNASGLNL TSDDDFFTNP TLRNFYQSHV RTVLNRVNTF
201: TNITYKNDPT IFAWELMNEP RCPSDPSGDK LQSWIQEMAV FVKSLDAKHL VEIGLEGFYG PSAPARTRFN PNPYAAQVGT DFIRNNQVLG IDFASVHVYP
301: DSWISPAVSN SFLEFTSSWM QAHVEDAEMY LGMPVLFTEF GVSAHDPGFN TSFRDMMLNT VYKMTLNSTR KGGAGAGSLV WQVFPQGAEF MDDGYAVYLT
401: RAHTASKIIS LQSKRLAIFN SLCSWRCRWG CKKKNQTALD ALLSHDEL

Arabidopsis Description

MAN6Mannan endo-1,4-beta-mannosidase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZV3]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.