Factsheet for GSMUA_Achr3P12210_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 1
vacuole 2
cytosol 3
extracellular 1
endoplasmic reticulum 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	vacuole
Plant-mPloc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P30560_001	Banana	vacuole	52.94	60.58
PGSC0003DMT400090248	Potato	cytosol	32.77	57.14
PGSC0003DMT400095096	Potato	cytosol	36.55	56.49
KRG96633	Soybean	nucleus	47.06	54.63
KRH68364	Soybean	vacuole	46.85	54.39
GSMUA_Achr6P12740_001	Banana	extracellular, vacuole	28.57	54.18
GSMUA_Achr6P27200_001	Banana	golgi, vacuole	46.22	53.92
GSMUA_Achr4P02940_001	Banana	golgi, vacuole	47.48	53.05
GSMUA_Achr4P07870_001	Banana	mitochondrion	42.23	52.21
Solyc01g008720.1.1	Tomato	extracellular, golgi, vacuole	43.91	52.12
KRH68408	Soybean	vacuole	45.38	52.05
GSMUA_Achr9P06930_001	Banana	extracellular	46.64	51.87
Solyc01g008710.2.1	Tomato	extracellular	43.28	51.63
KRH33420	Soybean	extracellular, golgi	36.34	50.88
KRG96685	Soybean	golgi, vacuole	44.75	50.84
GSMUA_Achr6P12730_001	Banana	golgi, vacuole	42.23	48.91
Bra033312.1-P	Field mustard	golgi, vacuole	42.23	48.91
CDX89985	Canola	golgi, vacuole	42.23	48.91
CDY15229	Canola	golgi, vacuole	40.76	47.55
AT1G02310.2	Thale cress	golgi, vacuole	41.6	45.94
GSMUA_Achr7P22010_001	Banana	cytosol	38.45	44.2
GSMUA_Achr9P08250_001	Banana	vacuole	41.39	43.78
GSMUA_Achr6P28970_001	Banana	extracellular, golgi	19.96	43.18
GSMUA_Achr5P22340_001	Banana	cytosol	35.29	42.64
GSMUA_Achr5P09360_001	Banana	endoplasmic reticulum, extracellular, vacuole	34.66	42.09
GSMUA_Achr8P24410_001	Banana	mitochondrion	30.88	41.88
GSMUA_Achr8P20030_001	Banana	golgi, plastid, vacuole	38.66	41.07
GSMUA_Achr3P09750_001	Banana	endoplasmic reticulum	39.92	40.95
GSMUA_Achr1P04970_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	37.4	40.83
GSMUA_Achr10P...	Banana	nucleus, plasma membrane, plastid, vacuole	36.76	36.31

Protein Annotations

EnsemblPlants:GSMUA_Achr3P12210_001	EnsemblPlants:GSMUA_Achr3T12210_001	EnsemblPlantsGene:GSMUA_Achr3G12210_001	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798
InterPro:Glyco_hydro_5	InterPro:Glycoside_hydrolase_SF	PANTHER:PTHR31451	PANTHER:PTHR31451:SF18	PFAM:PF00150	SEG:seg
SUPFAM:SSF51445	UniParc:UPI0002948A5F	UniProt:M0SDY8	MapMan:21.2.3.2.2	:	:

Description

Putative mannan endo-1,4-beta-mannosidase 9 [Source:GMGC_GENE;Acc:GSMUA_Achr3G12210_001]

Coordinates

chr3:+:9053075..9060726

Molecular Weight (calculated)

53347.2 Da

IEP (calculated)

6.102

GRAVY (calculated)

-0.219

Length

476 amino acids

Sequence
(BLAST)

001: MLLIDTQKGQ QPLEVAACRY RCLLATVFIA LIVVSQMHTE VLVHGLLLWT LLASRDSRAH GDTGFVRTNM THFLVNRRPF SLNGFNAYWL MYVASFPEEG
101: RSMVSSAFQE ASTHGLTLAR TWAFRDGGYK PLQRSPGVYD EDMFQGLDFV ISEAKKYGIY LVLSLVNNFE SFGGRTQYIQ WARDEGGHLS SDDDFYRDEV
201: VKSYYKNHVR AILTRVNTIT GVAYKDEAAI FAWELVNEPR CETDLSGRTL QAWIEEMAAH VKSIDSNHLL EVGLEGFYGE TIPERKKINL GYEMGTDFIS
301: NNQVQGVDFA TIHAYPDMWM PGSTEQTQLA FLQSWIQSHV EDADAVLRKP LLISEFGKSS RLSNRTGDVK AALYTTVYDA IYASARGGGA CRGGIFWNLL
401: LGVQEMEGLR DGYEVIFSES PSLGQIISNQ SHRISNLNGG SETEKKLRPA LPSGNQWSIS KRDRLLVSSN SNAGFV

Best Arabidopsis Sequence Match ( AT1G02310.2 )
(BLAST)

001: MSLTFHVVSF SFLQVGKSIT MLNILPFFLF FLPFLIGNNR ICVAVKTGFV GRNGTQFVLN GEQVYLNGFN AYWMMTTAAD TASKGRATVT TALRQASAVG
101: MNVARIWGFN EGDYIPLQIS PGSYSEDVFK GLDFVVYEAG RFNIKLIISL VNNFEDYGGR KKYVEWAGLD EPDEFYTNSA VKQFYKNHVK TVLTRKNTIT
201: GRMYKDDPTI FSWELINEPR CNDSTASNIL QDWVKEMASY VKSIDSNHLL EIGLEGFYGE SIPERTVYNP GGRVLTGTDF ITNNQIPDID FATIHIYPDS
301: WLPLQSSRTG EQDTFVDRWI GAHIEDCDNI IKKPLLITEF GKSSKYPGFS LEKRNKFFQR VYDVIYDSAR AGGSCTGGVF WQLTTNRTGL LGDGYEVFMQ
401: AGPNTTAQLI ADQSSKLKNL KYPPLVTHSA E

Arabidopsis Description

MAN1Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8AQX8]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.