Factsheet for GSMUA_Achr4P07870_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 4
vacuole 1
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P02940_001	Banana	golgi, vacuole	79.22	71.6
GSMUA_Achr9P06930_001	Banana	extracellular	75.06	67.52
GSMUA_Achr6P27200_001	Banana	golgi, vacuole	68.05	64.22
VIT_18s0001g12830.t01	Wine grape	extracellular, vacuole	68.05	60.51
VIT_04s0023g02130.t01	Wine grape	vacuole	67.01	59.58
KRH61141	Soybean	cytosol, nucleus, vacuole	62.6	59.51
PGSC0003DMT400009479	Potato	cytosol, nucleus, peroxisome	58.18	59.1
Zm00001d043965_P001	Maize	extracellular, vacuole	65.19	58.92
PGSC0003DMT400009055	Potato	extracellular, golgi, vacuole	65.19	57.97
Solyc02g084990.2.1	Tomato	nucleus	65.19	57.83
EES01213	Sorghum	golgi, vacuole	64.68	57.64
Os01t0663300-01	Rice	endoplasmic reticulum, golgi, vacuole	60.26	57.57
KRH51830	Soybean	endoplasmic reticulum, vacuole	61.82	56.67
TraesCS3B01G269200.1	Wheat	extracellular	62.34	56.47
KRH28716	Soybean	vacuole	61.82	56.0
TraesCS3D01G241300.1	Wheat	extracellular	61.82	56.0
TraesCS3A01G241000.1	Wheat	golgi, vacuole	61.82	56.0
Solyc04g080620.2.1	Tomato	endoplasmic reticulum, vacuole	58.44	54.48
HORVU3Hr1G060060.8	Barley	golgi, vacuole	62.08	53.59
GSMUA_Achr6P30560_001	Banana	vacuole	57.66	53.37
AT5G66460.1	Thale cress	vacuole	58.96	52.67
KRH15168	Soybean	extracellular, golgi, vacuole	57.92	51.98
KRH05852	Soybean	extracellular, golgi, vacuole	58.18	51.85
GSMUA_Achr6P12740_001	Banana	extracellular, vacuole	33.77	51.79
OQU79706	Sorghum	vacuole	41.04	50.64
KRH76746	Soybean	plasma membrane	61.82	50.64
CDY45231	Canola	extracellular, vacuole	58.7	48.19
GSMUA_Achr9P08250_001	Banana	vacuole	53.25	45.56
GSMUA_Achr6P12730_001	Banana	golgi, vacuole	48.57	45.5
CDY36280	Canola	endoplasmic reticulum, extracellular, vacuole	48.57	45.06
Bra034151.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	48.57	45.06
AT3G10900.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	47.27	44.61
CDX73899	Canola	extracellular	32.99	44.56
Bra001383.1-P	Field mustard	extracellular	47.53	44.1
AT3G10890.1	Thale cress	extracellular	46.49	43.24
GSMUA_Achr7P22010_001	Banana	cytosol	45.45	42.27
GSMUA_Achr3P12210_001	Banana	cytosol	52.21	42.23
GSMUA_Achr5P22340_001	Banana	cytosol	42.34	41.37
AT3G30540.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	35.06	41.03
GSMUA_Achr5P09360_001	Banana	endoplasmic reticulum, extracellular, vacuole	41.56	40.82
GSMUA_Achr8P24410_001	Banana	mitochondrion	36.1	39.6
GSMUA_Achr1P04970_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	44.68	39.45
GSMUA_Achr3P09750_001	Banana	endoplasmic reticulum	46.49	38.58
GSMUA_Achr8P20030_001	Banana	golgi, plastid, vacuole	42.6	36.61
GSMUA_Achr6P28970_001	Banana	extracellular, golgi	19.48	34.09
GSMUA_Achr10P...	Banana	nucleus, plasma membrane, plastid, vacuole	42.34	33.82
CDY68324	Canola	endoplasmic reticulum, vacuole	59.74	27.95

Protein Annotations

MapMan:21.2.3.2.2	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	EnsemblPlantsGene:GSMUA_Achr4G07870_001	EnsemblPlants:GSMUA_Achr4P07870_001
EnsemblPlants:GSMUA_Achr4T07870_001	InterPro:Glyco_hydro_5	InterPro:Glycoside_hydrolase_SF	UniProt:M0SM04	PFAM:PF00150	PANTHER:PTHR31451
PANTHER:PTHR31451:SF18	SUPFAM:SSF51445	UniParc:UPI000294BA89	SEG:seg	:	:

Description

Mannan endo-1,4-beta-mannosidase 1 [Source:GMGC_GENE;Acc:GSMUA_Achr4G07870_001]

Coordinates

chr4:+:5849403..5851387

Molecular Weight (calculated)

42920.3 Da

IEP (calculated)

9.772

GRAVY (calculated)

-0.451

Length

385 amino acids

Sequence
(BLAST)

001: MTLASDPSQR GKVSSAFREA SSHGLLVART WAFSDGGGNA LQYSPGHYNG QTFTGLDFVV SEARRYGIRL ILSLANNYDT FGGKKQYVQW ARNQGQYIAS
101: DDEFFTNPVV GGFYKNHVKT VLTRVNSITG VAYKDDPTIF AWELMNEPRC QSDWSGNSVQ ASKQIRWIAE MAAYVKSIDS NHLLEAGLEG FYGASSPQKQ
201: FNPRLLQVGT DFIANNRIPN IDFATIHVYP DQWLSASNDQ SQLAFLSNWI DVHIRDARDA LRKPLLVTEF GKSSKDPGFS VGQRDALFKT VYSKIYWSAR
301: SGGSAAGGFF WQLLSEGMGS YGDGYEIVLS EGSSTARIIA LQSRQLRYLG KWYARQRNVA KLNKAKAMRE EERQRRASKA ADAGN

Best Arabidopsis Sequence Match ( AT5G66460.1 )
(BLAST)

001: MKLLALFPFL AIVIQLSCWE LGTDALPSGG FVRTKGVQFS LNGYPYYANG FNAYWLMYVA SDPSQRSKIS TAFQDASRHG LTVARTWAFS DGGYRALQYS
101: PGSYNEDMFQ GLDFALAEAR RHGIKIILSF ANNYESFGGR KQYVDWARSR GRPVSSEDDF FTDSLVKDFY KNHIKAVLNR FNTFTKVHYK DDPTIMAWEL
201: MNEPRCPSDP SGRAIQAWIT EMAAHVKSLD RNHLLEAGLE GFYGQSSPQS KTLNPPGQFG TDFIANNRIP GIDFVTVHSY PDEWFPDSSE QSQMDFLNKW
301: LDAHIQDAQN VLHKPIILAE FGKSMKKPGY TPAQRDIVFN TVYSKIYGSA KRGGAAAGGL FWQLLVNGID NFQDGYGIIL SQSSSTVNVI SQQSRKLTLI
401: RKIFARMINV EKWKRARGQG QVGKRGHKIN N

Arabidopsis Description

MAN7MAN7 [Source:UniProtKB/TrEMBL;Acc:A0A178UNQ8]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.