Factsheet for VIT_18s0001g12830.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
peroxisome 1
plastid 1
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	secretory
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol, peroxisome, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0023g02130.t01	Wine grape	vacuole	74.36	74.36
KRH61141	Soybean	cytosol, nucleus, vacuole	69.28	74.07
KRH51830	Soybean	endoplasmic reticulum, vacuole	70.67	72.86
GSMUA_Achr4P07870_001	Banana	mitochondrion	60.51	68.05
PGSC0003DMT400009479	Potato	cytosol, nucleus, peroxisome	59.12	67.55
GSMUA_Achr4P02940_001	Banana	golgi, vacuole	65.59	66.67
GSMUA_Achr6P27200_001	Banana	golgi, vacuole	62.59	66.42
Solyc04g080620.2.1	Tomato	endoplasmic reticulum, vacuole	63.05	66.1
GSMUA_Achr9P06930_001	Banana	extracellular	64.67	65.42
KRH15168	Soybean	extracellular, golgi, vacuole	64.2	64.8
KRH05852	Soybean	extracellular, golgi, vacuole	64.2	64.35
Os01t0663300-01	Rice	endoplasmic reticulum, golgi, vacuole	57.51	61.79
TraesCS3D01G241300.1	Wheat	extracellular	59.58	60.71
EES01213	Sorghum	golgi, vacuole	60.51	60.65
Zm00001d043965_P001	Maize	extracellular, vacuole	59.58	60.56
TraesCS3B01G269200.1	Wheat	extracellular	59.35	60.47
TraesCS3A01G241000.1	Wheat	golgi, vacuole	58.89	60.0
OQU79706	Sorghum	vacuole	43.19	59.94
HORVU3Hr1G060060.8	Barley	golgi, vacuole	58.43	56.73
VIT_18s0089g00160.t01	Wine grape	vacuole	51.27	55.09
VIT_18s0089g00190.t01	Wine grape	extracellular, vacuole	50.81	54.73
VIT_18s0089g00180.t01	Wine grape	vacuole	42.73	54.57
VIT_18s0089g00170.t01	Wine grape	vacuole	50.12	53.85
VIT_18s0089g00200.t01	Wine grape	vacuole	48.5	50.72
VIT_08s0058g01460.t01	Wine grape	cytosol, nucleus, plastid, vacuole	47.34	50.25
VIT_18s0089g00140.t01	Wine grape	cytosol, peroxisome, plastid, vacuole	48.27	49.88
VIT_08s0058g01480.t01	Wine grape	cytosol, mitochondrion, vacuole	47.11	45.54
VIT_00s0187g00280.t01	Wine grape	golgi, vacuole	40.42	38.98
VIT_12s0028g03610.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	38.8	38.89
VIT_00s0187g00320.t01	Wine grape	golgi, vacuole	39.95	38.36

Protein Annotations

EntrezGene:100245556	wikigene:100245556	MapMan:21.2.3.2.2	Gene3D:3.20.20.80	ProteinID:CBI19729	ProteinID:CBI19729.3
UniProt:E0CQG0	EMBL:FN595227	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0016798
GO:GO:0016985	GO:GO:0046355	InterPro:Glyco_hydro_5	InterPro:Glycoside_hydrolase_SF	EntrezGene:LOC100245556	wikigene:LOC100245556
PFAM:PF00150	PANTHER:PTHR31451	PANTHER:PTHR31451:SF18	SUPFAM:SSF51445	SignalP:SignalP-noTM	TIGR:TC57785
UniParc:UPI00015C7C6C	ArrayExpress:VIT_18s0001g12830	EnsemblPlantsGene:VIT_18s0001g12830	EnsemblPlants:VIT_18s0001g12830.t01	unigene:Vvi.7507	RefSeq:XP_002281804
RefSeq:XP_002281804.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr18:+:10937041..10940329

Molecular Weight (calculated)

48968.6 Da

IEP (calculated)

9.519

GRAVY (calculated)

-0.455

Length

433 amino acids

Sequence
(BLAST)

001: MKSWALALLV LVFIQKQGNF LQVEAADGFV KTSGMHFVLN GLPYHANGFN AYWLMYVASD PSQRSKISSA FAEAAGHGLT IARTWAFSDG GYRPLQYSPG
101: SYNEQMFQGL DFVVSEAGKY GIKLVLSLAN NYESFGGKKQ YVDWARGQGQ YLTSDDDFFR NSVAKGYYKN HIKTVLTRRN SITGVVYKDE PTIMAWELMN
201: EPRCTSDPSG RTIQAWITEM ASYVKSVDGN HLLEAGLEGF YGQTSPQKQQ YNPNFQVGTD FIANNQIPGI DFATVHSYPD QWFSSSSDDT QLSFLNEWLK
301: NHIQDAQNVL RKPLLFTEFG KSSKDSGYST YQRDMLFNTV YSAIYSSARS GGAAVGGMFW QLLTEGMDSF RDGYEIVLSE SPSTANVIAQ QSHKLYLLRK
401: MYARLRNIQK WKRARAIRRA QWWNRNKGKN TGN

Best Arabidopsis Sequence Match ( AT5G66460.1 )
(BLAST)

001: MKLLALFPFL AIVIQLSCWE LGTDALPSGG FVRTKGVQFS LNGYPYYANG FNAYWLMYVA SDPSQRSKIS TAFQDASRHG LTVARTWAFS DGGYRALQYS
101: PGSYNEDMFQ GLDFALAEAR RHGIKIILSF ANNYESFGGR KQYVDWARSR GRPVSSEDDF FTDSLVKDFY KNHIKAVLNR FNTFTKVHYK DDPTIMAWEL
201: MNEPRCPSDP SGRAIQAWIT EMAAHVKSLD RNHLLEAGLE GFYGQSSPQS KTLNPPGQFG TDFIANNRIP GIDFVTVHSY PDEWFPDSSE QSQMDFLNKW
301: LDAHIQDAQN VLHKPIILAE FGKSMKKPGY TPAQRDIVFN TVYSKIYGSA KRGGAAAGGL FWQLLVNGID NFQDGYGIIL SQSSSTVNVI SQQSRKLTLI
401: RKIFARMINV EKWKRARGQG QVGKRGHKIN N

Arabidopsis Description

MAN7MAN7 [Source:UniProtKB/TrEMBL;Acc:A0A178UNQ8]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.