Factsheet for VIT_18s0089g00160.t01

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 7
plasma membrane 5
golgi 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0089g00180.t01	Wine grape	vacuole	78.41	93.22
VIT_18s0089g00170.t01	Wine grape	vacuole	88.83	88.83
VIT_18s0089g00140.t01	Wine grape	cytosol, peroxisome, plastid, vacuole	89.08	85.68
VIT_18s0089g00190.t01	Wine grape	extracellular, vacuole	81.64	81.84
KRH39855	Soybean	vacuole	71.46	70.76
KRH23949	Soybean	vacuole	70.22	69.53
VIT_18s0089g00200.t01	Wine grape	vacuole	67.74	65.94
GSMUA_Achr9P08250_001	Banana	vacuole	66.0	59.11
GSMUA_Achr6P12740_001	Banana	extracellular, vacuole	36.72	58.96
GSMUA_Achr6P12730_001	Banana	golgi, vacuole	57.32	56.2
VIT_18s0001g12830.t01	Wine grape	extracellular, vacuole	55.09	51.27
GSMUA_Achr6P28970_001	Banana	extracellular, golgi	27.54	50.45
VIT_04s0023g02130.t01	Wine grape	vacuole	53.6	49.88
VIT_08s0058g01460.t01	Wine grape	cytosol, nucleus, plastid, vacuole	48.64	48.04
VIT_08s0058g01480.t01	Wine grape	cytosol, mitochondrion, vacuole	48.64	43.75
VIT_12s0028g03610.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	41.94	39.12
VIT_00s0187g00280.t01	Wine grape	golgi, vacuole	42.93	38.53
VIT_00s0187g00320.t01	Wine grape	golgi, vacuole	42.43	37.92

Protein Annotations

EntrezGene:100255129	wikigene:100255129	EntrezGene:100267094	wikigene:100267094	EntrezGene:100267156	wikigene:100267156
MapMan:21.2.3.2.2	Gene3D:3.20.20.80	EMBL:AM445638	ProteinID:CAN71994	ProteinID:CAN71994.1	ProteinID:CBI17043
ProteinID:CBI17043.3	UniProt:D7SN14	EMBL:FN594956	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787
GO:GO:0016798	GO:GO:0016985	GO:GO:0046355	InterPro:Glyco_hydro_5	InterPro:Glycoside_hydrolase_SF	EntrezGene:LOC100255129
wikigene:LOC100255129	EntrezGene:LOC100267094	wikigene:LOC100267094	EntrezGene:LOC100267156	wikigene:LOC100267156	PFAM:PF00150
PFscan:PS51257	PANTHER:PTHR31451	PANTHER:PTHR31451:SF34	SUPFAM:SSF51445	SignalP:SignalP-noTM	UniParc:UPI00015CBFA7
ArrayExpress:VIT_18s0089g00160	EnsemblPlantsGene:VIT_18s0089g00160	EnsemblPlants:VIT_18s0089g00160.t01	RefSeq:XP_002270023	RefSeq:XP_002270023.1	RefSeq:XP_003634628
RefSeq:XP_003634628.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr18:-:27911940..27913691

Molecular Weight (calculated)

45196.4 Da

IEP (calculated)

6.402

GRAVY (calculated)

-0.219

Length

403 amino acids

Sequence
(BLAST)

001: MACFSRITSF SVLFLLVALA CEARVLLQSS GFVQTRNTQF ILNGSPFFFN GFNSYWMMNV AADPSQRSKV SDVFSQATAA RLSVCRTWAF NDGGSQALQI
101: SPGVYDERVF QGLDFVISEA RKNGVHLILS LSNNYKDFGG RPQYVSWARN AGAPVNSDDD FYTNEVVKGY YKNHVKRVLT RINTITRVAY KDDPTIMAWE
201: LINEPRCQVD YSGKTINGWI QEMASYVKSI DNNHLLTVGM EGFYGDSMPE KKAINPGYQV GTDFISNHLV KEIDFTTIHA YPDIWLSGKD DSSQMAFMQR
301: WMTSHLTDSE TIIKKPMVFS EFGKSSKDQG YSISARDTFL NAVYTNIYNF ARSGGIGGGL VWQLMVEGMQ SYDDGYDIVL SQNPSTSGII TQQSNKMIAL
401: DHV

Best Arabidopsis Sequence Match ( AT5G66460.1 )
(BLAST)

001: MKLLALFPFL AIVIQLSCWE LGTDALPSGG FVRTKGVQFS LNGYPYYANG FNAYWLMYVA SDPSQRSKIS TAFQDASRHG LTVARTWAFS DGGYRALQYS
101: PGSYNEDMFQ GLDFALAEAR RHGIKIILSF ANNYESFGGR KQYVDWARSR GRPVSSEDDF FTDSLVKDFY KNHIKAVLNR FNTFTKVHYK DDPTIMAWEL
201: MNEPRCPSDP SGRAIQAWIT EMAAHVKSLD RNHLLEAGLE GFYGQSSPQS KTLNPPGQFG TDFIANNRIP GIDFVTVHSY PDEWFPDSSE QSQMDFLNKW
301: LDAHIQDAQN VLHKPIILAE FGKSMKKPGY TPAQRDIVFN TVYSKIYGSA KRGGAAAGGL FWQLLVNGID NFQDGYGIIL SQSSSTVNVI SQQSRKLTLI
401: RKIFARMINV EKWKRARGQG QVGKRGHKIN N

Arabidopsis Description

MAN7MAN7 [Source:UniProtKB/TrEMBL;Acc:A0A178UNQ8]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.