Factsheet for TraesCS7D01G225500.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G190600.1	Wheat	vacuole	96.27	94.51
HORVU7Hr1G045910.1	Barley	vacuole	94.87	93.14
Os06t0311600-01	Rice	golgi, vacuole	84.85	82.73
TraesCS7A01G223800.1	Wheat	cytosol	73.43	79.35
OQU76322	Sorghum	golgi, vacuole	80.65	79.0
Zm00001d045873_P002	Maize	vacuole	79.49	78.39
GSMUA_Achr5P22340_001	Banana	cytosol	64.1	69.8
GSMUA_Achr8P24410_001	Banana	mitochondrion	53.38	65.24
VIT_00s0187g00280.t01	Wine grape	golgi, vacuole	60.61	57.91
PGSC0003DMT400034535	Potato	cytosol, nucleus, vacuole	52.68	57.22
VIT_00s0187g00320.t01	Wine grape	golgi, vacuole	60.14	57.21
Solyc11g012190.1.1	Tomato	golgi, vacuole	54.78	51.42
PGSC0003DMT400034545	Potato	cytosol	22.61	47.32
TraesCS3D01G273400.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	47.09	45.39
TraesCS5D01G145900.1	Wheat	cytosol	37.06	41.19
TraesCS3D01G241300.1	Wheat	extracellular	39.86	40.24
TraesCS6D01G312500.1	Wheat	golgi, vacuole	37.3	38.1
TraesCS6D01G311900.1	Wheat	vacuole	37.3	37.56
TraesCS6D01G312600.1	Wheat	vacuole	35.66	37.05
TraesCS5D01G504800.1	Wheat	vacuole	36.83	33.26

Protein Annotations

EnsemblPlants:TraesCS7D01G225500.1	EnsemblPlantsGene:TraesCS7D01G225500	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_5	InterPro:Glycoside_hydrolase_SF
PANTHER:PTHR31451	PANTHER:PTHR31451:SF1	PFAM:PF00150	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF51445
TMHMM:TMhelix	MapMan:21.2.3.2.2	:	:	:	:

Description

No Description!

Coordinates

chr7D:+:185189369..185202935

Molecular Weight (calculated)

48458.9 Da

IEP (calculated)

8.598

GRAVY (calculated)

-0.220

Length

429 amino acids

Sequence
(BLAST)

001: MRREKRLYSF LGLLLLLAVV YLNWLPGRDP AAPGGGGLKL PVPWLQPRMS FAGRNGTHFV DADTGAPLYV NGWNSYWLLS SRSPALVSEM LRRGRRMGLG
101: VCRTWAFIDG GPGALQISPG RFNEAVFQVL DYIIYEARRN HIRLILCLVN NLDNFGGKAQ YVKWAQAAGA NLTNSTDSFF YHPTIKGYYK DFVKAILTRR
201: NSYSGIRYSD EPAIFAWELM NEPRCVSNSS GPHLQAWIAE MAAYVKSLDT KHLVTVGIEG FYGTGIAERL GYNPGDWAAS FCSDFIQNSA VENIDFASVH
301: AYPDSWLPKA SMEEKLRYLS SWVDSHLNDS EHILKKPVLF SEVGYLQHVD GNSTVDRDIL LRVVYDKIYD SARKLQAGGG ALIWQLMVEG THMYHDDFSL
401: VARDHPSTYK LITEQSCRLQ MLYKNDKRP

Best Arabidopsis Sequence Match ( AT4G28320.1 )
(BLAST)

001: MVPTRNRPML RILGFFICAA FIYLSFRDLW LNHKGKAKLG FVKRNGTQFV VDDKPLYVNG WNSYWFMDHA VDEHSRNLVG EMLEAGAKMG LTVCRTWAFN
101: DGGYNALQIS PGRFDERVFQ ALDHVIAEAR KHDVRLLLSL VNNLQAYGGK TQYVKWAWQE GVGLSSSNDS FFFDPSIRNY FKNYLKVLLT RKNSVTGIEY
201: RNDPTIFAWE LINEPRCTTD VSGKTLQDWI DEMTGFIKSI DDKHLLTVGL EGFYGPNSPK GLTVNPEQWA SQLGTDFVQN SNSSNIDFAS VHIYPDHWFH
301: NQTFEEKLKF VVKWMQSHIE DGLKELKKPV LFTEFGLSNQ NKDYEPSQRD KFYRIIFDVV YKSAKRKKSG AGTLVWQLFM EGMETFNDDF GIVPHEQDSI
401: YKLMIEQSCR LGKVTGRLKE QKLKELCSHR H

Arabidopsis Description

MAN5Mannan endo-1,4-beta-mannosidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0H6]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.