Factsheet for TraesCS6D01G312500.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G363800.1	Wheat	golgi, vacuole	90.71	94.78
TraesCS6A01G333400.1	Wheat	golgi, vacuole	91.19	90.33
TraesCS6D01G311900.1	Wheat	vacuole	82.62	81.46
TraesCS6D01G312600.1	Wheat	vacuole	71.43	72.64
KXG31170	Sorghum	golgi, vacuole	61.19	62.23
GSMUA_Achr6P30560_001	Banana	vacuole	53.57	54.09
Zm00001d052158_P001	Maize	golgi, vacuole	56.43	53.5
PGSC0003DMT400090248	Potato	cytosol	34.05	52.38
KRH68364	Soybean	vacuole	50.48	51.71
PGSC0003DMT400095096	Potato	cytosol	37.86	51.62
KRG96633	Soybean	nucleus	50.24	51.46
Solyc01g008710.2.1	Tomato	extracellular	46.43	48.87
Solyc01g008720.1.1	Tomato	extracellular, golgi, vacuole	45.48	47.63
TraesCS3D01G241300.1	Wheat	extracellular	47.86	47.29
KRH68408	Soybean	vacuole	44.76	45.3
KRG96685	Soybean	golgi, vacuole	44.52	44.63
Bra033312.1-P	Field mustard	golgi, vacuole	43.57	44.53
TraesCS5D01G145900.1	Wheat	cytosol	40.71	44.3
CDX89985	Canola	golgi, vacuole	43.33	44.28
CDY15229	Canola	golgi, vacuole	42.38	43.63
KRH33420	Soybean	extracellular, golgi	34.05	42.06
AT1G02310.2	Thale cress	golgi, vacuole	42.86	41.76
TraesCS5D01G504800.1	Wheat	vacuole	46.43	41.05
TraesCS3D01G273400.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	39.52	37.3
TraesCS7D01G225500.1	Wheat	vacuole	38.1	37.3
Os02t0766900-00	Rice	extracellular, golgi, vacuole	37.62	37.0

Protein Annotations

EnsemblPlants:TraesCS6D01G312500.1	EnsemblPlantsGene:TraesCS6D01G312500	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_5	InterPro:Glycoside_hydrolase_SF
PANTHER:PTHR31451	PANTHER:PTHR31451:SF20	PFAM:PF00150	SignalP:SignalP-noTM	SUPFAM:SSF51445	MapMan:21.2.3.2.2

Description

No Description!

Coordinates

chr6D:+:421788279..421790723

Molecular Weight (calculated)

46324.9 Da

IEP (calculated)

7.643

GRAVY (calculated)

-0.243

Length

420 amino acids

Sequence
(BLAST)

001: MGTSNARWLM LVSCLAVMAL AAGARRSSIH DAAPPPNRAG GVKAQVGGFA RADGQRFMVG GRPFYPNGFN AYWLMYMALN PADRSKVLDV LDQASRLGAT
101: VIRTWAFNDG GSNRPLQTTP GVYSEDVFVG LDFVIAEAKK RGLYLILSLV NNWGDFGGKK QYVQWAKDQG HNLGSEDDFF RDALAQQFYK KHVERVVTRV
201: NSFTGLAYKD EPSIFAWELM NEPRVPTDPS GKTMQAWVTL MSSYVKSIDD KHMVEVGLEG FYGESTPERK RINPGGDSAG TDFIGNNRIP TVDFATIHYY
301: PDVWLPGSTR EQQVDFWKTW MASHIEDTAK ALRKPLVVAE FGWNSVGNAV AARDDYFRMV YDAIYASVKG GGPCAGGLFW QVLAPGMESW ADRYAVVLEG
401: SSTTAAIVSQ EFARIGGSRP

Best Arabidopsis Sequence Match ( AT1G02310.1 )
(BLAST)

001: MLNILPFFLF FLPFLIGNNR ICVAVKTGFV GRNGTQFVLN GEQVYLNGFN AYWMMTTAAD TASKGRATVT TALRQASAVG MNVARIWGFN EGDYIPLQIS
101: PGSYSEDVFK GLDFVVYEAG RFNIKLIISL VNNFEDYGGR KKYVEWAGLD EPDEFYTNSA VKQFYKNHVK TVLTRKNTIT GRMYKDDPTI FSWELINEPR
201: CNDSTASNIL QDWVKEMASY VKSIDSNHLL EIGLEGFYGE SIPERTVYNP GGRVLTGTDF ITNNQIPDID FATIHIYPDS WLPLQSSRTG EQDTFVDRWI
301: GAHIEDCDNI IKKPLLITEF GKSSKYPGFS LEKRNKFFQR VYDVIYDSAR AGGSCTGGVF WQLTTNRTGL LGDGYEVFMQ AGPNTTAQLI ADQSSKLKNL
401: KYPPLVTHSA E

Arabidopsis Description

MAN1Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8AQX8]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.